Pairwise Alignments

Query, 510 a.a., Inner-membrane proton/drug antiporter (MSF type) of tripartite multidrug efflux system from Variovorax sp. SCN45

Subject, 511 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  227 bits (578), Expect = 9e-64
 Identities = 145/492 (29%), Positives = 235/492 (47%), Gaps = 10/492 (2%)

Query: 17  ISIMLATIMQALDTTIANVALPHMQGSLQASQDQITWVLTSYIVASAIALPLTGWLCGHW 76
           + + +A  +  LDTTIANV++ ++ GSL  S  Q T+V+TSY VA AI++PLTGWL   +
Sbjct: 22  LCLAMANFLAILDTTIANVSVSNIAGSLGTSTSQGTYVITSYAVAEAISVPLTGWLASRF 81

Query: 77  GRRRVFIISVIGFTVASALCGLATSLVGIVAARLLQGIFGAALVPLSQAVLLDINPREKV 136
           G  RVF+   + F V S LCGLA S+  +V  R+L G  G  L+PLSQ +++ I P+ K 
Sbjct: 82  GSIRVFVTCFLLFGVFSLLCGLANSMSTLVMFRVLLGFVGGPLMPLSQTLMIRIFPKNKS 141

Query: 137 GQAMAIWGAGIMVGPILGPLLGGWLTENFDWRWVFFINLPVGIFA---FWGIARYLPESR 193
             A+ IW    +V PI+GP+LGG L +   W ++FFI +P  I A    W + +   E++
Sbjct: 142 HAAIGIWSMTTLVAPIMGPILGGVLCDQLSWPYIFFIKMPFAIAAALLCWKLLKKF-ETK 200

Query: 194 PQGEKLDIFGFVTLSLAIGMLQLFLDRGEQLDWFDSWEIKLEAAAALVAFGFFVVHTWTV 253
               K+D  G   L + +  LQL LD G+  DWF+S  I   A  A++ F  F++   T 
Sbjct: 201 TTHSKIDKVGLALLVVWVAALQLMLDEGKDHDWFESSRIVFLAVIAVIGFIAFLIWELTE 260

Query: 254 QGVSFFDRDLLKDRNFVTGLLFAFIVGMILFATMALLPNFLQGLMGYPVVYTGQVTAPRG 313
           +     D  + + R +   ++   +     F+   + P +LQ  MGY    +G  TA  G
Sbjct: 261 RN-PVVDLKVFRHRGYSISMVTLSLAFGAFFSISVVTPLWLQIYMGYTATISGHATASMG 319

Query: 314 VGTMIAMIIVGRLVQKVDVRAIMAVGFGLTAFSLYQMTRLTLQMDSTLIIVSGFIQGLGI 373
           +  +    IV  L  K D R  +  G        +     T+ M  + I    F QG+G+
Sbjct: 320 ILAVFLAPIVANLSSKFDPRPFVFAGVMWLGLWTFMRGFNTVDMTFSQISWPLFFQGIGM 379

Query: 374 GFTFVPLSTATFATLAPRLRNQGTPIFSLLRNIGSSVGISIVQALLTEGSSKAHAQIAAT 433
              FVPL+     ++ P        + + +R +  +   S++       +   HA++A  
Sbjct: 380 PLFFVPLTAIALGSVKPHEMESAAGLMNFIRTLSGAFATSMINTSWEHETRYVHAELAGL 439

Query: 434 VAPGNQALSTLPQ--MMSPDTMTGLALLNAEVTRQGALVGYLDDFAIMMIITVLAIPLLL 491
                 A   +    M +  T + +  +   +  Q  +V     F ++ +I V A  ++ 
Sbjct: 440 TDKAGVATQAMQNSGMSAEQTRSAMDWI---LQNQSVMVATNQLFIVIALIFVFAACMIW 496

Query: 492 LIRSPKRSAAAS 503
               PK++   S
Sbjct: 497 FAPKPKQAVDTS 508