Pairwise Alignments

Query, 283 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 17/259 (6%)

Query: 24  AMDSARHYGRHWHATYGVGLLDHGAQSSASGRGKVDAYAGDLITTNPGEVHDGRPLGGPS 83
           A    +++ RH H  Y VG+++ GAQS     G   A    +I  N  EVH G       
Sbjct: 29  AQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTGHSAVEGG 88

Query: 84  RRWRMVY---FDAAVMAGMRGDDTGGHDVELTRPVLRDSRLSGALRSLFVRLDEWQALHA 140
             ++ +Y      A +A   G +TG       + V+ D  L+  LR +F  L++      
Sbjct: 89  WAYKAMYPLPEQFATVAKEIGANTGAP--YFPQAVVYDPELASQLRLVFETLEK------ 140

Query: 141 SRAATAEALACEESLAEVCGLLLEAHSTALSLRETGGDVRRLR--ERLADDLLDAP-SLE 197
              +T   L      A +  L+     TA    +    +R L   +   DD   A  SLE
Sbjct: 141 ---STNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDDFPQADVSLE 197

Query: 198 QLAAMAGLSKFQVLRRFEKAYGVPPHAWLLLQRGERARALIRRGESLAGAAAASGFADQS 257
           +LA +AGLS F ++R F+K +G+PPHA+ +  R   A+ L+++G S++  A   GF DQS
Sbjct: 198 ELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQS 257

Query: 258 HMTRVFTRHFGFTPGAWQR 276
           H+ R F +  G TP  + R
Sbjct: 258 HLHRHFKKALGITPKQYAR 276