Pairwise Alignments

Query, 295 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  110 bits (274), Expect = 5e-29
 Identities = 77/288 (26%), Positives = 136/288 (47%), Gaps = 2/288 (0%)

Query: 3   NRLEALRVFCAAADAANFRDAAVRLSVSPQVVTRAVRELEDELGEPLFHRSTRGVQLTDF 62
           +R++ ++ F A     +F  AA RL +S Q+V++ V +LE+ L   L +R+TR V +T+ 
Sbjct: 4   DRIDTMKAFTAVVQEGSFTKAADRLGLSSQLVSKYVSQLEEHLKVRLLNRTTRRVNVTEA 63

Query: 63  GRQLAERARVAVGGVDELFHRTDRRALSQHEGTVRVTAPGIFGRRLIPQALAPMLAAHPG 122
           GR   ER +  +  ++E+ +     + +   G ++V+AP  FG   +P AL      HP 
Sbjct: 64  GRAYFERCQQVLIDIEEMDNALTNLSETA-SGLLKVSAPMSFGIHHLPSALVQFQQQHPD 122

Query: 123 LLLDLRVSEEHADMVDQQIDIGVRVGPLRDARFVARPVGKMALHVVAAPSLIARTGLPKN 182
           + LD+ ++++  D+++  +D+ +R+G L  +  +A+ +  + L V A+P  +A  G PK 
Sbjct: 123 VRLDITLTDKKVDLLEDGVDVALRIGQLTSSSLIAKKLTPIKLVVCASPEYLAERGEPKT 182

Query: 183 IDALAGMPLTALIDRMSGRPWPMIFSKGRQLAVTSPAFVTDDFDAEGAAVLAGLGFAQLI 242
              L             G  +         L + S     ++ D    A +AG G     
Sbjct: 183 PADLIHHNYLHFSYSDLGAAFGRFGEHFSALKIPSD-LACNNGDMLVEAAIAGRGIVVQP 241

Query: 243 GSLAEPGLASGALVPVLEADAPEPWPIYVYRAQRAPVPARVRLVYDEL 290
             L    L SG L  +L    PEP+ +Y     R  + ++VR   D L
Sbjct: 242 TFLVSKALRSGKLKAILTDYTPEPFGLYAVYVHRKFLASKVRCFVDAL 289