Pairwise Alignments

Query, 799 a.a., 3-hydroxyacyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.1.1.35) / Enoyl-CoA hydratase [fadN-fadA-fadE operon] (EC 4.2.1.17) from Variovorax sp. SCN45

Subject, 708 a.a., 3-hydroxyacyl-CoA dehydrogenase, NAD-binding (RefSeq) from Shewanella loihica PV-4

 Score =  102 bits (253), Expect = 1e-25
 Identities = 111/407 (27%), Positives = 188/407 (46%), Gaps = 47/407 (11%)

Query: 5   QVKKVAVLGAGVMGAQIAAHLVNVRVPVVLFDLAAKEGPKN-GIVTRAID-NLKKLKPAP 62
           +++KVAV+G+G MG  IA + +NV +P  + DL  +   +  G++ +  +  LKK     
Sbjct: 298 EIRKVAVIGSGTMGGGIAMNFINVGIPTQILDLNGEALERGLGVIRKNYEYTLKK----- 352

Query: 63  LGDVADAVLIEQA---NYEDDLARLGECDLVIEAIAERMDWKLDLYKKIAPHVAKHSILA 119
            G ++ A L E+    +   D A + + DLVIEA+ E+M+ K  ++K +       +ILA
Sbjct: 353 -GKLSQAQLDERMALLSGTTDYADIADVDLVIEAVFEKMEIKKQVFKTLDATCKPGAILA 411

Query: 120 SNTSGLSITKLSEALPEALKPR-FCGIHFFNPPRYMFLVELINTPTTQPQVLDDLEAFVT 178
           +NTS L +    E   E  +P+   G+HFF+P   M L+E++    T P  L      + 
Sbjct: 412 TNTSTLDV---DEIAAETSRPQDVLGLHFFSPANVMRLLEIVRANKTAPDAL-LTTVQLA 467

Query: 179 STLGKGVVRAHDTPNFIANRVGIAGMLATLKEVEKFGLTPDVVDDL---TGKKLGRASSG 235
             + K  V +     FI NR   + +  ++  + + G +P  +D +    G  +G  S  
Sbjct: 468 QRIKKVPVVSGVCWGFIGNRATDSYLRESMSLILE-GASPAQIDKVHTEFGMPMGLPS-- 524

Query: 236 TFRTADVVGLDTMAHVVKTLQDNLNAETDPFYANFATPPVLAKLLELGNLGQKTKAGFFK 295
                D+ G+D     + T +D     TD   ++FA   +L KL      GQKT  G + 
Sbjct: 525 ---MVDLAGIDV---GILTREDRKAFTTDLDPSHFA---ILHKLYAKQRYGQKTGRGLYI 575

Query: 296 KVGRDILRFDLKSGEYVPAGAKADEVYGRMLKKPAGERLKLLRESEGPQGQFLWAILRDG 355
             GRD      +  E +   A+A + +G   + P     + + E      + ++ I+ +G
Sbjct: 576 YEGRD----KQEDPEVLELAAEAAKEFGVTRRSPEQISDQEILE------RTIYPIINEG 625

Query: 356 FHYAAVHLGDIAESARDIDFAMRWGFG---MKQGPFELWQEAGWAQV 399
              A +    IA  A DID  + +GFG    + GP +   E G  +V
Sbjct: 626 ---ARILEEGIALRASDIDIVLAYGFGFPIFRGGPMQYADEIGLERV 669



 Score = 62.4 bits (150), Expect = 8e-14
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 15/147 (10%)

Query: 522 AEAEYKGLVIWSPDEMFSVGADLQAMLPAFVVAGIGAVEGAEEELQNVMLKIRYANVPVI 581
           A+     +V+ S  ++F  GAD+        +A        E  L  V   +  +   V+
Sbjct: 43  ADESVDAIVLASSGKLFCGGADISEFSSDDALA--------EPNLPQVCDALEASPKLVV 94

Query: 582 SAVRGLALGGGCELAVYSAKRVAAMESYIGLVEVGVGLIPGAGGLTYIARRAAENASAST 641
           +AV GLALGGGCEL +    R+A   + +GL EV +G++PGAGG   + R      +   
Sbjct: 95  AAVNGLALGGGCELTLACDYRIALPAAKLGLPEVNLGILPGAGGTQRLPRIGGVQLA--- 151

Query: 642 GTDLLPFLTEGFTAAAMAKVGTGALDS 668
               L  +T G    A A +  G +D+
Sbjct: 152 ----LEMITSGRPLGAAAMLDAGVIDN 174