Pairwise Alignments

Query, 398 a.a., 3-ketoacyl-CoA thiolase [fadN-fadA-fadE operon] (EC 2.3.1.16) from Variovorax sp. SCN45

Subject, 399 a.a., Thiolase from Pseudomonas syringae pv. syringae B728a

 Score =  293 bits (751), Expect = 5e-84
 Identities = 182/410 (44%), Positives = 245/410 (59%), Gaps = 27/410 (6%)

Query: 4   VQDAYIVSATRTPIGKSHRGYFRNYRPDDLLATTLRAALAAVPSLDPKAIEDIICGCAIP 63
           +++ +I  A RTPIG+   G   + R DDL A  ++A +   PS++ + I+++  GCA  
Sbjct: 1   MREVFICDAIRTPIGRFGGG-LSSVRADDLAAVPIKALMERNPSVNWEEIDEVFFGCANQ 59

Query: 64  ESQQGLNVARIGAVLAGLPTSVGGITVNRFCASGLSAVQMAADRIRVGEADVMIAAGVES 123
             +   NVAR+ A+LAGLP SV G+T+NR CASG+ A+  A   I  GE ++ IA GVES
Sbjct: 60  AGEDNRNVARMAALLAGLPQSVPGVTLNRLCASGMDAIGTAFRAIASGEIELAIAGGVES 119

Query: 124 MSMVP-MMGNSPS-LSPSIFEREGDVG---------IAYG---MGLTAEKVAQQWKVSRE 169
           MS  P +MG + +  S ++   +  +G           YG   M  T + VA  +++SR 
Sbjct: 120 MSRAPFVMGKADAAFSRNMKLEDTTIGWRFINPAMKAQYGVDSMPETGDNVATDFRISRA 179

Query: 170 AQDEFALASHQKALAAQKAGKFADEITPIEVTDRTPNLETGESIAKTRTVNLDEGARPDT 229
            QD FAL S Q+   AQ AG F +EI P+ V  +      GE++     V+ DE  R DT
Sbjct: 180 DQDAFALRSQQRTAVAQAAGFFEEEIVPVRVAHKK-----GETL-----VDKDEHPRGDT 229

Query: 230 SLEGLAKLRTVFAARGTVTAGNSSQTSDGAGALILASEKAVKQYGLTPLARFVSFASKGV 289
           SLE L+KL+ V     TVTAGN+S  +DGA ALILAS +AVK++GLTP AR +  AS  V
Sbjct: 230 SLETLSKLKPVNGPDRTVTAGNASGVNDGAAALILASAEAVKKHGLTPRARVLGMASAAV 289

Query: 290 PPHIMGIGPIEAIPAALRYAGLKHEDIDWFELNEAFAAQSLAVINTLGL--DPSKVNPMG 347
            P +MGIGP+ A+   +   GL   D D  ELNEAFA+Q LAV+  LGL  D  +VNP G
Sbjct: 290 APRVMGIGPVPAVRKLVERLGLAVTDFDVIELNEAFASQGLAVLRELGLADDAPQVNPNG 349

Query: 348 GAIALGHPLGATGAIRSATVVHALRRENLKYGMVTMCVGMGQGAAGIFER 397
           GAIALGHPLG +GA    T +H L +   + G+ TMCVG+GQG A   ER
Sbjct: 350 GAIALGHPLGMSGARLVLTALHHLEKTGGRRGLATMCVGVGQGLALAIER 399