Pairwise Alignments

Query, 391 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 405 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 72/285 (25%), Positives = 115/285 (40%), Gaps = 32/285 (11%)

Query: 2   RRRTLGLLAGALVAAPALVFARVRPLRIGVIGSWSGPY---AGGGRQFDAGMAVWLAAHN 58
           R+    +LA +L+A+ A        +RIG +   SG Y   +G G      MAV      
Sbjct: 5   RKSASAILASSLIASAAQAEISNDEIRIGYLADMSGTYRDLSGPGGLEALKMAV--EDFG 62

Query: 59  HHIAGRPVELLRRDVPGSAPDQARRHAQDLVESEKVDLLSGLDFSSNAYAVGAVAAQARM 118
             + G+ + +   D   + PD      +  ++   VD+++G+  SS   A   V  Q   
Sbjct: 63  GKVDGKKIVVFHAD-DLNKPDVGANTVRQWIDERNVDMVTGMVASSVVLAASKVVEQGGK 121

Query: 119 PLIVMNAASSGITAR--CPFAVRVSFTIAQVTLPLARWALQQGLRDVCTVVADYASGVDA 176
             ++  AA+S IT     P  +  ++    +    A+  L  G +    + ADYA G   
Sbjct: 122 LALISGAAASSITNEFCSPNHIHWTYDTYALANGTAKAVLADGGKSWYILTADYAFGHAM 181

Query: 177 ESAFVSGITAGGGRVGAMLRVPLATLDYSAYMLR------------------LRELKPQA 218
           E+     +   GG V   +R P  + D+S+YML+                  +  LK  +
Sbjct: 182 EADITKVVEGDGGSVVGKVRHPFPSNDFSSYMLQAQGSGAEVIALANAGADTVNSLKTAS 241

Query: 219 VFFFLPSGQMPAGFLKFWRD---RGMADTGIRLLSTG---DATDD 257
            F    SGQ  AG + F  D    G+  T   +L+TG   D  DD
Sbjct: 242 EFGVTQSGQKLAGMVVFLNDIHAMGLDVTQGLMLTTGWYWDMNDD 286