Pairwise Alignments

Query, 391 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 394 a.a., Extracellular ligand-binding receptor (NCBI) from Rhodospirillum rubrum S1H

 Score = 68.2 bits (165), Expect = 4e-16
 Identities = 91/364 (25%), Positives = 143/364 (39%), Gaps = 31/364 (8%)

Query: 17  PALVFARVRPLRIGVIGSWSGPYAGGGRQFDAGMAVWLAAHNHH--IAGRPVELLRRDVP 74
           PAL+     PL        +G  A  GR F     + L   N    + GRPV++L  D  
Sbjct: 39  PALLLGYELPL--------TGANAAYGRVFQEAARLQLDRFNAAGGVGGRPVDILYADSR 90

Query: 75  GSAPDQARRHAQDLVESEKVDLLSGLDFSSN-AYAVGAVAAQARMPLIVMNAASSGITAR 133
             A DQAR  A+  V+  +V  + G DFSS  + A G++  +  MP +   AA       
Sbjct: 91  DDA-DQARTIARAFVDDPRVVGVLG-DFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKI 148

Query: 134 CPFAVRVSFTIAQVTLPLARWALQQGLRDVCTVVADYASGVDAESAFVSGITAGGGRVGA 193
            P+  R   T A      A W +  G   V  +      G+ +  AF       GG V  
Sbjct: 149 SPWQFRAITTPAFEGPNNAAWMIGDGFTSVAVIGVTTDWGLSSAQAFRKAFELRGGAVVV 208

Query: 194 MLRVPLATLDYSAYMLRLRELKPQAVFFFLPSGQMPAGFLKFWRDRGMADTGIRLLSTGD 253
              VP     +   +  + +  PQA++  + + +  A FL+  R RG A   + +  +  
Sbjct: 209 NEEVPPGNRRFDDVIDEIEDEAPQAIYLAM-AYEDAAPFLRALRARGSA---LPVYGSSA 264

Query: 254 ATDDNYLQGIGELADGLVTSHHYSFAHESTANRRFTGVFETEYGSHLRPGYFAVAAHDAL 313
                ++   G   +G+  +  +           F   +ET YG+   P  FA   +DA+
Sbjct: 265 LYSPKFIDLGGPAVEGVRLATAFVLGASDPVVVEFVSAYETLYGA--IPTLFAAHGYDAV 322

Query: 314 AAIDAAMSSPAARGNAGGERLVDAFRGLKLDSPR-----GPLEIDAHTRDVVQTVYIRRV 368
             + AA+      G AG E   ++ R     + R     G    D  TR+  + +  R V
Sbjct: 323 GIMLAAV------GRAGPEVTRESLRDALAATDRYAGVTGITRFDPETRETTK-ILTRLV 375

Query: 369 ERQG 372
            R+G
Sbjct: 376 VREG 379