Pairwise Alignments

Query, 512 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  221 bits (562), Expect = 7e-62
 Identities = 145/506 (28%), Positives = 253/506 (50%), Gaps = 32/506 (6%)

Query: 26  VETDSGLFYSWRDVERASAMIANLLEALGLEKGARIAVQVEKSVEAMLLYLATLRAGYVF 85
           V  D  L +++++ +  + ++A  L  +G++KG  I +      + +    AT + G V 
Sbjct: 26  VYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVL 85

Query: 86  LPLNTAYQSAEIEYFIGNAE--PAVVVCTSRNASW-------VAPIATAAG--------- 127
           + +NTAY+S E+ Y +  ++     ++ + R+ ++       V  + T+           
Sbjct: 86  VTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKLNSEEFP 145

Query: 128 -TKHVFTLDDDR------TGTLLEVAAQCSDRHTPARRK---ADDMAAILYTSGTTGRSK 177
             K+V  +  ++      T  L+ +    SD      +K   +DD+  + YTSGTTG  K
Sbjct: 146 YLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLDSDDVINMQYTSGTTGFPK 205

Query: 178 GAMLSHGNLLSNAEVLKDYWGWTEGDVLIHALPIFHVHGLFVALHGALLNGSKMLWFSKF 237
           G ML+H N+L+N   + +   +TE + L   +P+FH  G+ + +   L +G  ++    F
Sbjct: 206 GVMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVLALLTHGGTLVMLEIF 265

Query: 238 DPKRIVQKLPE--ATVFMGVPTLYVRLLAEPGLTREAVRNMRLFIAGSAPLLIETFEE-W 294
           DP  ++  + +   T   GVPT+++   + P      + ++R  I   +   IE  ++  
Sbjct: 266 DPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLSSLRTGIMAGSTCPIEAMKKVM 325

Query: 295 RERTGHTILERYGMSETAMLTSNPYNPAQGERRGGTVGFALPGVQLRVRD-DSGRDCTTD 353
            +     I   YG++E + + +        E+R  +VG A+P  ++++ D ++G      
Sbjct: 326 SDMYMREITISYGLTEASPVFTMTSVDDPFEKRVESVGKAMPHCEVKIIDPETGETLAPG 385

Query: 354 EIGNIEVSGPNVFSGYWRMPEKTKEEFTADGFFKTGDVGKIDGLGYITIVGRSKDLIISG 413
            +G I   G NV  GY++MPEKT E    DG+  +GD+   D  GY  IVGR KD+II G
Sbjct: 386 NVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDMIIRG 445

Query: 414 GYNVYPAEIEGYINEMAGVAESAVVGVPHPDFGEVGVAIVIPKAGASLDADAIVADLKSK 473
           G N+YP EIE ++  M G+ ++ VVG+P   +GE+  A VIPK G  +  + +      K
Sbjct: 446 GENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEGYEIKEEDVRDFALEK 505

Query: 474 LANFKIPKRCFVVPELPRNTMGKVQK 499
           +A +K+PK  FVV E P    GK+QK
Sbjct: 506 IARYKVPKHVFVVEEFPMTASGKIQK 531