Pairwise Alignments

Query, 610 a.a., Efflux ABC transporter, permease/ATP-binding protein mlr7818 from Variovorax sp. SCN45

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  320 bits (820), Expect = 1e-91
 Identities = 209/591 (35%), Positives = 323/591 (54%), Gaps = 22/591 (3%)

Query: 23  DRSDWATLRRLFPYLWQYKWRVIAALTFMVGAKVANVGVPVLLKNLVDTM--TPKPDMAQ 80
           D S+W T +RL+ Y+  YK  ++ +   +V    A+  +  LLK L+D      + +  +
Sbjct: 6   DESNWQTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLR 65

Query: 81  ALLIVPIGLLLAYGLLRFSTALFGELRELIFAKATEGTARQIALEVFGHLHSLSLRFHLE 140
            L  + +GL+   GL  F+++          +  +     Q+   +F H   + +RF  +
Sbjct: 66  ILPFMILGLMFVRGLSGFASSY-------CLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQ 118

Query: 141 RQTGGMTRDIERGTRGVHSLISMSLYSIVPTIIELVLVLCILGVKFDSLFVWITLAALVL 200
             TGG+   I   +  V    S +L SIV     ++ +L ++   ++S  + + L  +  
Sbjct: 119 ESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMF--WNSWQLSLVLIVVAP 176

Query: 201 YITFTVTVTEWRTQFRKTMNELDSM---AQSRAVDSLLNYETVKYFNNEEFEAKRYDASL 257
            + F ++    R  FRK    + +      S A   L  ++ V  +  +E E KR+D   
Sbjct: 177 VVAFAISFVSKR--FRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVS 234

Query: 258 DRYRKAAIKSQRTLSMLNTGQQALIAISLVLMLWRATSGVVDGRMTLGDLVMVNAFMIQL 317
           +  R+  +K     S+ +   Q + +++L  +L+ A+   +   +T G   +V + M  L
Sbjct: 235 NSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGL 294

Query: 318 YIPLNFLGVIYREIKQSLTDLDKMFVLMEKEREVRDAP-EAQPLAGTDSTVRFEDVSFAY 376
             PL  L  +  E ++ +     +F LM+ E E  +   EA+ + G    V  +DV+F Y
Sbjct: 295 MRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDNGKYEAERVNGE---VDVKDVTFTY 351

Query: 377 E-PARPILKHVSFEIPAGKTVAVVGPSGSGKSTLARLLYRFYDVQHGHITIGGEDIRDVT 435
           +   +P L HVSF IP GKTVA+VG SGSGKST+A L  RFYDV  G I + G D+RD  
Sbjct: 352 QGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYK 411

Query: 436 QSSVRRAIGIVPQDTVLFNDTVEYNIAYGRPGA-TREEVEAAARAARIHDFISATPKGYE 494
            +++RR   +V Q+  LFNDT+  NIAY   G  TRE++E AAR A   +FI   P+G +
Sbjct: 412 LTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLD 471

Query: 495 TTVGERGLKLSGGEKQRVAIARTLLKNPPIVIFDEATSALDSANERAIQSELKSAAQDKT 554
           T +GE G  LSGG++QRVAIAR LL++ P++I DEATSALD+ +ERAIQ+ L    ++KT
Sbjct: 472 TVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKT 531

Query: 555 TLVIAHRLSTVVDAHEILVLESGVIVERGTHAELLAKQGRYAQMWALQKSE 605
            LVIAHRLST+  A EILV++ G I+ERG HA+LLA+ G YAQ+  +Q  E
Sbjct: 532 VLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQFGE 582