Pairwise Alignments

Query, 222 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 365 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

 Score =  122 bits (305), Expect = 1e-32
 Identities = 72/216 (33%), Positives = 116/216 (53%), Gaps = 5/216 (2%)

Query: 8   FYNWSLVSTYVLKGFYFSVILTVVATLGGIFFGTLLALMRLSGKKWLDFPAAAYVNGMRS 67
           F     V T    G   +V++  V   G +  G LLAL R S    +      ++   R 
Sbjct: 144 FLGLQTVPTSQWGGLMLTVVIAAVGIAGALPLGILLALGRRSDMPAIRVLCVTFIEFWRG 203

Query: 68  VPLVMVILGFFLLVPFVI--GHPIGAETSAVITFICFEAAYFSEIMRAGIQSIPRGQVFA 125
           VPL+ V+    +++P  +  G  +     A++  + FEAAY +E++R G+Q+IP+GQ  A
Sbjct: 204 VPLITVLFMSSVMLPLFLPEGMNLDKLLRAMLMVVFFEAAYIAEVVRGGLQAIPKGQYEA 263

Query: 126 GQAVGMTYSQNMKLVILPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFETAGKN 185
             A+G+ Y ++  LVILPQA + ++P ++   I LF+DTSLV  IG +D L   + A  +
Sbjct: 264 AAAMGLGYWRSTLLVILPQALKLVIPGIVNTFIALFKDTSLVIIIGLFDFLNSIKRATAD 323

Query: 186 ---FGRPEEAYLLAAVVYFVLCYALSWLVKRLHKKI 218
               G   E Y+ AA+VY++ C+ +S    RL +K+
Sbjct: 324 PAWLGMSTEGYVFAALVYWMFCFGMSRYSMRLERKL 359