Pairwise Alignments

Query, 222 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 323 a.a., amino-acid transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  107 bits (267), Expect = 3e-28
 Identities = 73/218 (33%), Positives = 117/218 (53%), Gaps = 8/218 (3%)

Query: 3   NLDFSFYNWSL---VSTYVLKGFYFSVILTVVATLGGIFFGTLLALMRLSGKKWLDFPAA 59
           NL F+F    L   +S  V+   Y SVI   VAT+       + A+ +LS    +   A 
Sbjct: 104 NLSFAFIAKKLSFLISQGVVTTLYISVISIAVATV----IALVGAIAKLSKNGVIYGLAT 159

Query: 60  AYVNGMRSVPLVMVILGFFLLVPFVIGHPIGAETSAVITFICFEAAYFSEIMRAGIQSIP 119
            Y +  R +PL+M I   +L +P V G+ I A  + ++       AY +EI RAGI+SIP
Sbjct: 160 FYTSLFRGLPLLMQIYIIYLGLPQV-GYVISAVPAGILALSLCYGAYMTEIFRAGIESIP 218

Query: 120 RGQVFAGQAVGMTYSQNMKLVILPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGF 179
           RGQ     A+G++ SQ M LVILPQA R ++P    Q I + +D+SL+  +G ++++   
Sbjct: 219 RGQTEGATALGLSPSQTMGLVILPQAMRVIIPPTGNQFIAMLKDSSLISVVGVWELMYLA 278

Query: 180 ETAGKNFGRPEEAYLLAAVVYFVLCYALSWLVKRLHKK 217
            T G+   R  E  + A+++Y++L   L ++  R+  +
Sbjct: 279 RTQGQTEFRHIEMLITASMIYWILSIGLEYMQSRVEAR 316