Pairwise Alignments

Query, 222 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 230 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  190 bits (482), Expect = 2e-53
 Identities = 106/210 (50%), Positives = 139/210 (66%), Gaps = 8/210 (3%)

Query: 21  GFYFSVILTVVATLGGIFFGTLLALMRLSGKKWLDFPAAAYVNGMRSVPLVMVILGFFLL 80
           G  F++ LT++ TL G   GT LA++RLS    L   A  Y+N MRS+PLV++I   + +
Sbjct: 21  GMTFTLGLTLLGTLAGGLLGTALAMLRLSSLPVLPHLATLYINLMRSMPLVLLIFWVYFM 80

Query: 81  VPF----VIGHP----IGAETSAVITFICFEAAYFSEIMRAGIQSIPRGQVFAGQAVGMT 132
           VP+    ++G      +G  TS+++TF  FEAAYF+EIMR+GIQS+ RGQ  A QA+G+T
Sbjct: 81  VPYLGQWILGTDRPMQVGTFTSSLLTFTLFEAAYFAEIMRSGIQSVSRGQTAAAQALGLT 140

Query: 133 YSQNMKLVILPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFETAGKNFGRPEEA 192
           Y Q+M  V+LPQAFR MLPVLLTQ I+LFQDTSLVY +   D L       +  GR  E 
Sbjct: 141 YFQSMGHVVLPQAFRAMLPVLLTQVIVLFQDTSLVYVLSITDFLGAASKVAQRDGRLVEM 200

Query: 193 YLLAAVVYFVLCYALSWLVKRLHKKIAIIR 222
           YL AAVVYF + +A S LVKR+  + AIIR
Sbjct: 201 YLFAAVVYFAISFAASLLVKRIQARTAIIR 230