Pairwise Alignments

Query, 222 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 223 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  107 bits (268), Expect = 1e-28
 Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 4/219 (1%)

Query: 2   MNLDF-SFYNWSLVSTYVLKGFYFSVILTVVATLGGIFFGTLLALMRLSGKKWLDFPAAA 60
           M LDF +   W  V   +L G + ++I+T+     G   GT   L + +  K     A  
Sbjct: 1   MALDFKASVMWESVPL-LLGGVHLTIIITLGGLAIGFLLGTATGLAKTARGKLPRALADI 59

Query: 61  YVNGMRSVPLVMVILGFFLLVPFVIGHPIGAETSAVITFICFEAAYFSEIMRAGIQSIPR 120
           YV  +R  PL++ ++  +  VP   G  I   T+ +I       AY +EI+R  ++SI  
Sbjct: 60  YVEAIRGTPLIVQVMFLYFGVPLATGMRIPPVTAGIIAIAVNSGAYIAEIVRGAVESIDV 119

Query: 121 GQVFAGQAVGMTYSQNMKLVILPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLK-GF 179
           GQ  AG+++G+T  Q +  V+ PQAFR M+P L  Q II  +DTSL+  IG  ++ + G 
Sbjct: 120 GQTEAGRSIGLTRMQTLLYVVWPQAFRRMIPPLGNQFIISLKDTSLLVVIGVGELTRQGQ 179

Query: 180 ETAGKNFGRPEEAYLLAAVVYFVLCYALSWLVKRLHKKI 218
           E    NF R  E +L  AV+Y V+  +++  ++   +K+
Sbjct: 180 EIIAVNF-RAFEVWLTVAVMYLVMTLSIARALRVYERKL 217