Pairwise Alignments

Query, 481 a.a., Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily / DUF3471 domain from Variovorax sp. SCN45

Subject, 712 a.a., penicillin-binding protein from Caulobacter crescentus NA1000

 Score = 77.0 bits (188), Expect = 2e-18
 Identities = 80/357 (22%), Positives = 158/357 (44%), Gaps = 28/357 (7%)

Query: 5   LERLVEASMREWKIPGLALAVVRDGELVHQKGYGVRDMRGAEPVTPE-TQFLLCSITKSL 63
           ++ +V+ +M    I G+ L+VV++G++V +KGYG  ++   + V P+ T F + SI+K+ 
Sbjct: 103 VDGVVQRAMTRDHIAGVTLSVVQNGQVVLKKGYGFSNLGQRKQVDPDKTLFRVASISKTF 162

Query: 64  TAAGLGLLIDEGRLEWNRPVREVIPE-FRLHDALATERLTVRDLLCHRSGLPRHDWVHMP 122
           T   L   I+ GR+  + PV   +PE  ++ D     ++ +RDL+ H SG        + 
Sbjct: 163 TWITLMNEIEAGRMRLDGPVNLYLPEPLQVKDQGKKTQIRLRDLMTHTSGFEDRALGQL- 221

Query: 123 GDLGGAQMLPLLRHLAPSRELRDTF-----QYSNLGYMVAGMVTERISGQRWEDFTTERL 177
            +    ++ PL  +L   R  R         YSN G  +AG     ++G+ +E   +E +
Sbjct: 222 FERDPNRVRPLYDYLRQERPRRVREPGLMPTYSNYGAALAGAAVSNVTGKPFEQLVSEEI 281

Query: 178 LKPLGFKDFGF-------------TIEALEAADNAARPHAMVGDECVPSPLWPIRTTAGG 224
           + P G     F               E L A  + A     +G +  P      +     
Sbjct: 282 IIPAGLTRTTFREARPWRDDLPAPMAETLAADLSDAFSWTAMGWKTQPREFMG-QVAPAA 340

Query: 225 GMNVSLADIAKWARFLLDEGKVNGAQLLSAKSLREMCTPHVHMGRSEHAEIGDSHYGFGL 284
             + + +D+A++   LL+ G ++G  + S ++ +   +P ++    + A          L
Sbjct: 341 SASSTASDMARYMTLLLNGGTIDGKTIFSPRTAQAFRSP-MYRPAPDAAGWNAGFQDVPL 399

Query: 285 FCENYRGDRTYAHSGSWLGWGTLMTVVPERRTAVVVLTNR-APSTVTSILTYAVLDH 340
                 G R + H G+ L + + + +VP+    + V  N  + + + + L   +++H
Sbjct: 400 ----PGGRRGFGHQGATLYFHSNLVIVPDLNLGIFVSVNTDSGANLPATLPATIVEH 452