Pairwise Alignments

Query, 345 a.a., TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein from Variovorax sp. SCN45

Subject, 332 a.a., C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide from Sinorhizobium meliloti 1021

 Score =  147 bits (370), Expect = 5e-40
 Identities = 93/325 (28%), Positives = 156/325 (48%), Gaps = 11/325 (3%)

Query: 9   GLAAAATALGMFSTGAMAQAAYKPEYKMSLVLGPPTPWGQAGKIWADMVKERTQGRINIK 68
           GLAA   A G+    A + A  +   ++  VL     W +A   +A  V E+T+GR+ I+
Sbjct: 11  GLAATVIA-GIVGLSAHSAAMAETTIRLGHVLADTHSWHKASTDFAKEVSEKTEGRVKIE 69

Query: 69  LYPGVSLIQGDQTREFSALRQGVIDMAVGSTINWSPQVKQLNLFSMPFLMPDYAAIDALT 128
           ++P   L  G +      ++ G I   +  + ++     +  +  MP+         A  
Sbjct: 70  IFPSGQL--GTEKEVIEGMQIGTIQGGLIGSGSFQFVEPKFGIIEMPYAWTSREQAFAAL 127

Query: 129 QGEVGKEMFKTLEKAGVVPLAWGENGFREITNSKKPIKSPADIKGMKIRVVGSPIYSDMF 188
            G++G  +   L   G+  LAW ENGFR ITN+K PI  PAD+ G+KIRV    +    F
Sbjct: 128 DGKLGTALADLLRPKGIEVLAWWENGFRNITNNKHPIVKPADLAGIKIRVTPDKVRLATF 187

Query: 189 TALGANPTQMSWADAQPALASGAVDGQENPLFLFTVLKMQTVGQKFVTTWGYVADPLVFV 248
             LGA P  +++ +   AL  G  D QENPL +        V QK+V+  G++       
Sbjct: 188 ERLGAQPAPLAFGELYSALQQGVFDAQENPLSIIDASSFYEV-QKYVSMTGHIWGAACLT 246

Query: 249 VNKEIWASWTPADQAIVRQAAIDAGKEEIVLARKGLVETDKPVLKDIAGMGVTVTSLTPA 308
           V+   WA  +P DQAIV++AA+  G  +    R+ + + +  +++ +   G+        
Sbjct: 247 VSSMTWAQVSPEDQAIVKEAAVKWGNAQ----RQMVADNEVALIEKLKSKGM---QFNEV 299

Query: 309 EREEFVKATRPVYDKWKSTVGTDLV 333
           ++  FV A +P+++  K   G +L+
Sbjct: 300 DKAAFVDALKPIWESEKDVFGPELL 324