Pairwise Alignments

Query, 345 a.a., TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein from Variovorax sp. SCN45

Subject, 325 a.a., periplasmic C4-dicarboxylate transport protein from Sinorhizobium meliloti 1021

 Score =  136 bits (343), Expect = 7e-37
 Identities = 91/279 (32%), Positives = 149/279 (53%), Gaps = 10/279 (3%)

Query: 45  PWGQAGKIWADMVKERTQGRINIKLYPGVSLIQGDQTREFSALRQGVIDMAVGSTINWSP 104
           P  +  K + ++VKERT GR ++++Y    L  G++      +R GVI++   S   ++ 
Sbjct: 39  PTVEGVKYFGELVKERTAGRYSVEVYHSAQL--GEEKDTIEQVRSGVIELNRVSMAPFNG 96

Query: 105 QVKQLNLFSMPFLMPDYAAIDALTQGEVGKEMFKTLEKAGVVPLAWGENGFREITNSKKP 164
            VK+  + ++P+L      +  +  G +G ++ K  E AGVV LA+ + G R   N +KP
Sbjct: 97  TVKESIVPALPYLFRSEEHMHKVMDGAIGDQIKKAFEGAGVVVLAFYDAGARSFYNKQKP 156

Query: 165 IKSPADIKGMKIRVVGSPIYSDMFTALGANPTQMSWADAQPALASGAVDGQENPLFLFTV 224
           I +  D+KG+K RV+ S I+ DM  ALGAN T M + +    + +G +DG EN    +  
Sbjct: 157 INTVEDMKGLKFRVIQSDIFVDMVAALGANATPMPYGEVYSGIETGVIDGAENNFPSYDT 216

Query: 225 LKMQTVGQKFVTTWGYVADPLVFVVNKEIWASWTPADQAIVRQAAIDAGKEEIVLARKGL 284
            K   V + + +   +   P VFV+NK  +   TP DQ I +QAA D+  ++  L    +
Sbjct: 217 AKHFEVAKNY-SLDEHTILPEVFVMNKAAFDKLTPEDQEIFKQAAKDSVAKQRELWAAKV 275

Query: 285 VETDKPVLKDIAGMGVTVTSLTPAEREEFVKATRPVYDK 323
            E+   V  + AG  +T    TP E++ F+ A +PVY+K
Sbjct: 276 KESRAKV--EAAGAKIT----TP-EKQGFIDAMKPVYEK 307