Pairwise Alignments

Query, 650 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (377), Expect = 3e-40
 Identities = 145/565 (25%), Positives = 254/565 (44%), Gaps = 39/565 (6%)

Query: 45  STYEIFRNAGHAFGDKTALTFLRTGNPADEPIRWSYAELLARLHQTANMLHT-LGVGPQD 103
           S  E+F  + H + D+ A  F+  G         ++ +L  R    A  L   L +   D
Sbjct: 24  SLVEMFEQSVHKYADQPA--FMNMGAVM------TFRKLEERSRAFAAYLQNDLKLKKGD 75

Query: 104 AVAVLLPGCLEYHLALWGGEAAGIVQP-LNPLLTDEKLVALMTAARAKVLIAYGSDSESG 162
            VA+++P  L+Y +AL+G   AG++   +NPL T  +L   +  A A+ ++   S+  + 
Sbjct: 76  RVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARAIVIV-SNFANT 134

Query: 163 MWSKAMRLRGQVPTLTTVLRVAPHDEAP---GAAGQLPEGVAEFDVLRAAQPDDRLVSGR 219
           +       + +   LT++ ++ P  +          +   V ++D+  A      L  GR
Sbjct: 135 LEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPGAISMRKALHKGR 194

Query: 220 DI-------APSDIAAYFHTGGTTGAPKLARHSHG---AQVFTAWASVQVAGMNDQGISI 269
            +       +  DIA   +TGGTTG  K A  +H    A V  A  +        + + +
Sbjct: 195 RLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYGPVLQEGRELVV 254

Query: 270 NGYPLFHVAGVLPASLSSLSAGVEVIIPTTSLLRNKEVLANYWKLVARYRPTSLSAVPTV 329
              PL+HV  +    L  +  G   +     L+ N   +  + K + +Y  T+++ V T+
Sbjct: 255 TALPLYHVFALTVNCLLFIEMGGRNL-----LITNPRDIPGFVKELQKYPFTAITGVNTL 309

Query: 330 LAALAN-VPLDGADISSITYCRTGAAVLAPELAARFERLFGLHVHESLGMTEMAGISTIT 388
             AL N       D  ++     G   +   +A R+++  G+H+ E  G+TE + + T  
Sbjct: 310 FNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLTECSPLVTGN 369

Query: 389 PPGVNGPAGCVGFRLPYMQMRVVALDENGNASDREMPPGEQGMVLFKSPNVFSGFVD-PA 447
           P  +    G +G  +P  ++R+V  D+ GN     +P  + G +  + P V  G+   P 
Sbjct: 370 PYDLTDYTGAIGLPVPSTEVRIV--DDAGNV----VPNDQVGELQVRGPQVMQGYWQRPE 423

Query: 448 DNAKAFTADGWLATGDLGWIDSEERLNLTGRSKDLIIRSGHNIDPKTIEDALGAHPAVQL 507
              +   A+GWL+TGD+   D +  +++  R KD+I+ SG N+ P  IED +  H  V  
Sbjct: 424 ATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKVLE 483

Query: 508 CAAVGAPDAYAGELPVIFATLVPGASATEEELLAFTAARVDEAPARPKWVSVIETMPMTN 567
            AA+G  +  +GEL  I+  +    S T++E++A     +      PK V   + +P TN
Sbjct: 484 VAAIGQANDVSGELVKIY-VVKRDPSLTKDEVIAHCRKHLTGYKV-PKLVEFRDDLPKTN 541

Query: 568 VGKIYKPELRAMAAQRVVAAAVAEA 592
           VGKI +  LR     ++ A A   A
Sbjct: 542 VGKILRRVLREENDAQLAAKAKQSA 566