Pairwise Alignments

Query, 297 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  128 bits (321), Expect = 2e-34
 Identities = 80/292 (27%), Positives = 157/292 (53%), Gaps = 8/292 (2%)

Query: 5   SLTLLVEILDAGNLSAAARRLKMTRANVSYHLNQLERSVGAQLVRRTTRRAEPTEIGLRL 64
           +L + V +++ G+ S A ++L ++++ +S  ++QLE+ +G QL++RTTR    T+ G R 
Sbjct: 6   ALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDAGARY 65

Query: 65  YQH---GVAIQGELLAARESVTTLGQGLQGRVRLSVPSGYGQLVMADWLIDFKRQYPGIV 121
           +++    V +  E L   ++++ L Q  +G +R+SVP  +G+L +A  + +F ++YP I 
Sbjct: 66  FEYIRPAVQLTQEGL---DAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPDIQ 122

Query: 122 LDVVFENRIEDLLRDEVDIAIRVIPEPPQNLVAREMGPVRYVACASADYAARHPLPVQLD 181
           L +  +++I DL+    D+AIR+   P  +L+AR++ P   V CAS  Y  +H LP+   
Sbjct: 123 LQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMTPC 182

Query: 182 ALQGAPVVTAAVIGRQLRVSAYQGETRREVILEPTLISENFLFLRQAILAGLGIGLVPDY 241
            L     +  +     +  S +  +  + V  +      N   + QA L GLGI  +P +
Sbjct: 183 ELTQHNCLFYSYFQDGVEWSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIANLPRF 242

Query: 242 VVQEDVRKGDVATTLDDWRLSIFGTQMFMLYMPNRQHTRAIRTFIDFVLERV 293
           +V+ D++ G +   L D+ L   G  ++ +Y   +     +   I+F++ ++
Sbjct: 243 IVEPDLQTGHLQALLTDYPLPEHG--IYAVYPQRKYQPTKVTVLIEFLMAKL 292