Pairwise Alignments

Query, 320 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 278 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 20/229 (8%)

Query: 101 AVLSAGDFALYDSTRPYELLFE----ESFEQIVLKLPGDRLRGELRD-----TEALTATT 151
           A + AGDF L D+  PYE+ ++    E FE + L L    +    R+     + A+    
Sbjct: 56  ATVRAGDFFLTDTQEPYEMRWQTLEGERFEVMHLYLGLPLIEQAARELLGPQSSAVALLD 115

Query: 152 VSG-REGAGHLLLGMIRTLREDIDTLQPASALAVAHGVQSILVAGLQTL--PAARAPALS 208
           VSG R+   H L+  +R  RE +D   P S L +    Q++ +  L+    P     + +
Sbjct: 116 VSGARDETVHWLMESMR--RELLDQRTP-SQLCLRGLAQTLAMHLLRHYRDPQGAIRSSN 172

Query: 209 NLTAYHLARVKRLIDEQLADPMLSVGTLAAQLGVSVSHIHRVFK-SEPLTPSQYIWERRL 267
            L AY L RV   ++ QLAD   S+  LA    +S  H  R+FK +  L+PSQY    R+
Sbjct: 173 ALPAYKLRRVVEEMNAQLADDF-SLTRLARSAELSEYHFSRMFKRATGLSPSQYFIGLRM 231

Query: 268 EACSRDLLEPRLAGRPVAEIAYGRGFNDAAHFSRAFRERFGCSPRAWRQ 316
               + L+E +   R V +I    G++  +HFS+ FR   G +P A+RQ
Sbjct: 232 ARARQLLIETQ---RSVIDIGLEVGYSSPSHFSQVFRREVGVTPSAYRQ 277