Pairwise Alignments

Query, 320 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 312 a.a., AraC-family transcriptional regulator from Caulobacter crescentus NA1000

 Score =  169 bits (427), Expect = 1e-46
 Identities = 116/318 (36%), Positives = 164/318 (51%), Gaps = 11/318 (3%)

Query: 1   MTQLLSTDAVSRDQR-LAYWTDMICNVYVQLECDAVQQSGTGNFEGSIRQHTLPSLDMSV 59
           M   L    V R Q  L  W  ++ + +  L  DA +++    FEGSI    L  +D++ 
Sbjct: 1   MASSLDEQGVVRTQAGLDAWNALVASTFDNLVVDADREA----FEGSIDVRDLGGMDLAR 56

Query: 60  VTSGPQKVMRTPGHIAHSSDDYFLVSIQARGQGVVRQDGRDAVLSAGDFALYDSTRPYEL 119
           V S    V R  G  + +   YF + +Q  G+ +  QDGR+AVL  GD  L D  RPY +
Sbjct: 57  VASSAAVVRR--GRASWTRRPYFKLHLQDVGRSLNSQDGREAVLDEGDLMLCDPARPYTI 114

Query: 120 LFEESFEQIVLKLPGDRLRGELRDTEALTATTVSGREGAGHLLLGMIRTLREDIDTLQPA 179
            F++    +VL++P +RL   + D EAL    ++G   AG LL   IRTL  +       
Sbjct: 115 RFDDPNRMLVLRIPSERLADRMDDPEALCGRRLAGDSLAGALLTSFIRTLWTNAGRGCAP 174

Query: 180 SALAVAHGVQSILVAGLQTLPAARAPALSNLTAYH--LARVKRLIDEQLADPMLSVGTLA 237
              AV     S+L A  +      APA  +L A H   AR+KR ID+ L DP LSVG +A
Sbjct: 175 VGEAVQDAALSLLSAAARE-GEGEAPAPRDLDASHGAGARIKRFIDDNLCDPELSVGRVA 233

Query: 238 AQLGVSVSHIHRVFKSEPLTPSQYIWERRLEACSRDLLEPRLAGRPVAEIAYGRGFNDAA 297
             LGVS  ++  VF     TP  YI  +RLE  +R L E  + G  + ++++G GFND +
Sbjct: 234 GALGVSPRYVQMVFAGMATTPLAYIRRKRLERAARALREDGV-GCNITDLSFGLGFNDLS 292

Query: 298 HFSRAFRERFGCSPRAWR 315
           HFSRAF+  +G  PR +R
Sbjct: 293 HFSRAFKAFYGVGPREFR 310