Pairwise Alignments

Query, 298 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 330 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 73/281 (25%), Positives = 138/281 (49%), Gaps = 9/281 (3%)

Query: 9   LAVVIWSGNTVVSKMAAGTIAPAEISFYRWLLAALLFTPLALRPVLRNWRAI-RPQLGRI 67
           +A  +W G     ++A   ++P  ++  R+LLA  +   L +      W  + R Q   +
Sbjct: 26  IATALWGGTFTAGRIAVQQLSPLAVACGRYLLATTVL--LLILWQREGWPPLNRRQQLLL 83

Query: 68  AVLGLLGMVVYQSLAYYAAYLTTATHMGIIGSLTPMMVLALSIVLLGQRLTAGAVAGSLV 127
             LG+ G+ +Y  L +    L  A+   +I +L P  +   + +  G RL +   AG  +
Sbjct: 84  FGLGVSGIALYNWLFFIGLSLIPASRAALIIALNPTAIALGAAIWTGDRLRSWQWAGVGL 143

Query: 128 SIMGVLVVVSSGDLGTLLKSGANMGDGLMLLAMLAYAIYVILLKRWGMKGVPALQLLYLQ 187
           S++G ++++ S   G L   G   GD  ++  +L + +Y  LL R  ++ +  L +    
Sbjct: 144 SLIGAILLLGSRQAGALTLPG--WGDLALVGCVLCWTVYS-LLARQALRSLSPLTVTTGA 200

Query: 188 IVFAVIALLPLYL---LTPRMGLSAANLPLIGFAGLGASMLAPLVWMHTVAHIGPSRASM 244
             +  + L+ L+L       + +S +    I F GLG + LA  ++ + +  +G +RA +
Sbjct: 201 CCWGSVLLIGLWLGQGAQLPVNVSFSTGSAIAFLGLGGTALAFCLYANGIERLGAARAGL 260

Query: 245 FFNLIPLFTALIAAVVIGESLAAYHAIGGVLTVAGVLLAEL 285
           F NL+P+F + I A+++ E L+    +GG+L +AGV L  L
Sbjct: 261 FINLVPVFGSAIGALLLQEPLSGLTLLGGLLVLAGVGLGTL 301