Pairwise Alignments

Query, 298 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 298 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 63.5 bits (153), Expect = 5e-15
 Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 27/284 (9%)

Query: 9   LAVVIWSGNTVVSKMAAGTIAPAEISFYRWLLAALLFTPLALR--PVLRNWRAIRPQLGR 66
           L VV WS   V  + A+       + F+R LL+ ++  P AL   P+LR  R I  Q+  
Sbjct: 24  LLVVGWSSGFVGIRYASEEAGVMLVLFWRTLLSGVILLPFALTIGPLLR-MRGIAEQM-- 80

Query: 67  IAVLGLLGMVVYQSLAYYAAYLTTATHMGI---IGSLTPMMVLALSIVLLGQRLTAGAVA 123
             + G++ + +Y  L  +A  +      G+   I  L P+ + ALS  +LG+RL+A    
Sbjct: 81  --LFGVMSVFLY--LGGFALAIEQRVPTGLVALISDLLPLAIAALSQPVLGERLSARQWF 136

Query: 124 GSLVSIMGVLVVVSSGDLGTLLKSGAN--MGDGLMLLAMLAYAIYVILLKRWGMKGVPAL 181
           G+ +++ GVL+V         L  GA      GL + +ML +A+  +L KR   + +P  
Sbjct: 137 GTAIAVFGVLIVSFDS-----LSFGAAPLWAYGLTVGSMLVFALASVLHKRRRTQHMPVH 191

Query: 182 QLLYL-----QIVFAVIALLPLYLLTPRMGLSAANLPLIGFAGLGASMLAPLVWMHTVAH 236
           Q L +      ++F + A++   L  P   L+ A    + +  L A+  A  ++  ++  
Sbjct: 192 QSLCIHTLTGSVLFGLCAMMQGDLAPP---LTRAFAVGMVWLVLIATFAAYSIYYTSLRL 248

Query: 237 IGPSRASMFFNLIPLFTALIAAVVIGESLAAYHAIGGVLTVAGV 280
              ++ S    L P  T L A  +  E L A   IG   T+ GV
Sbjct: 249 FPVAQVSAAIYLSPPVTMLWAWALFSEPLTAATFIGLTATLVGV 292



 Score = 28.9 bits (63), Expect = 1e-04
 Identities = 14/40 (35%), Positives = 24/40 (60%)

Query: 243 SMFFNLIPLFTALIAAVVIGESLAAYHAIGGVLTVAGVLL 282
           ++  +L+PL  A ++  V+GE L+A    G  + V GVL+
Sbjct: 108 ALISDLLPLAIAALSQPVLGERLSARQWFGTAIAVFGVLI 147