Pairwise Alignments

Query, 710 a.a., Tetrapartite efflux system, inner membrane component FusBC-like from Variovorax sp. SCN45

Subject, 666 a.a., membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

 Score =  203 bits (517), Expect = 2e-56
 Identities = 176/623 (28%), Positives = 270/623 (43%), Gaps = 55/623 (8%)

Query: 11  RAELLFSGKSFVAAMLAMYLASRAGLPRPFWALMTTYVVAHPLAGAVRSKAVYRFCGTLI 70
           R  L F+ K+ + A LA++LA R GL +P WALMT  +VA PL+G V  K + R  GTL+
Sbjct: 13  RLALQFAIKTVLGAGLALWLALRWGLEQPSWALMTAIIVAQPLSGMVVQKGLARLVGTLV 72

Query: 71  GSTATVLLVPALSNAPELLTLVLALWVGLCLCISLFDRTPRSYVFMLAGYTAALIGFPSV 130
           G+  +V+ +   + AP L  L LALW+GLC   S   R+  SY F+LAGYT A+I  P++
Sbjct: 73  GTVMSVVFMGLFAQAPWLFLLALALWLGLCTACSTLLRSAWSYSFVLAGYTVAIIALPAI 132

Query: 131 QTPLALFDTAVARVEEIGLGIFCATLIHSLVLPAGLAPTVLGLLDRTLLDARKWLGDLLQ 190
             PL +FD AVAR  EI LGI CAT   +L+ P  +   + G           W   +  
Sbjct: 133 SHPLGVFDQAVARCTEISLGIVCATAASALLWPLRVERQLAGQA------LAAWQSGMQA 186

Query: 191 PAAHGGGNGANGGEPKRLDDDRRRLAGDITQLRLLSTHVPFDTTHLRWTAGAIRAMQDRV 250
             A   G+        +       + G I  +     H  F+ +  R  A AI  +  ++
Sbjct: 187 ARATLAGD-------VQARKGLLEILGRIVAVDAQREHAWFEGSRGRQRARAISGLSQKL 239

Query: 251 AALTPALSAVEDRLQALAQAEGRLAPDVTAVLAQAAQ-WLREEAEP-GADAATRAERLQT 308
             L     +V  + + L   E           A+A Q W+ E  +   AD+AT    LQ 
Sbjct: 240 LMLLRLSRSVRRQWKQLDPEE-----------AEALQPWMNEVQQALDADSAT----LQA 284

Query: 309 LRRAIDALSATPANAQPQHTAWGRALRIGLAGRLEELVDGWTACAQLRQDIDEGLKGAAP 368
           LR  +   S  P  +  Q     R   +        L     ACA L   + EG + A P
Sbjct: 285 LRPRVWDASHDPQISSAQSYCLARFALL--------LDTALAACAALTA-VQEGREAADP 335

Query: 369 LRRTAALGSRVLHRDYGMALLSALAAVIAICLCGAFWILTGWPMGSAATMMAAVFCCFFA 428
            R  A       HRD  +A++    + +A      FW+ T WP  S A ++  V C  FA
Sbjct: 336 PRTLAP------HRDLSLAMVFGARSALAFLAVACFWLATAWPAASGALVLTCVVCSLFA 389

Query: 429 TMDDPVPAIHGFLKWTLWSIPISALYVLVLMPMVQDFGMLVLICAPLLLLLGLYLPRPTH 488
           + ++       FL+  L ++P + +   +L+P    F ML +     L    L + +P  
Sbjct: 390 SRENGAQIGMSFLRGILLAVPTAFVLGELLLPQWSSFAMLCMAMGVPLFFGALGMAKPQI 449

Query: 489 FMAAMALIFGVCGTLALHDTASSDLVSFINSMIGQVVGVVVAARVTRLVRSVGADWSARR 548
           F  A +        ++  +    D+ +F N+    ++GV  A     ++      W +RR
Sbjct: 450 FATATSFCLHFVVLISPLNAMKYDVAAFFNNAQAMMIGVGAAVLAFNVLILRNPAWHSRR 509

Query: 549 IQRATWRELGDMAASSQPQYAQSDAYAVRMLDRIGLLA---PRI-AQAGGTVE----GVA 600
           +  AT  +L  +  + +        +  RM DR+  LA   P +  QA    +    G+ 
Sbjct: 510 LLAATLHDL--VRLTHRSLRGAESWFGGRMADRLLQLARHYPELPVQARSRWDDGLLGLD 567

Query: 601 ANDALRDLRMGADIAVLQRVRGQ 623
             D L  LR+   +A +   R Q
Sbjct: 568 IGDELLHLRLSLAVAQVPDTRAQ 590