Pairwise Alignments

Query, 312 a.a., Tetrapartite efflux system, membrane fusion component FusE-like from Variovorax sp. SCN45

Subject, 365 a.a., protein secretion protein from Sinorhizobium meliloti 1021

 Score =  124 bits (310), Expect = 4e-33
 Identities = 102/329 (31%), Positives = 146/329 (44%), Gaps = 68/329 (20%)

Query: 24  LVVAAAVWAGLRLWDHYELAPWTRDGRVRANVVQIAPDVSGLVTAVPIRDNQPVAAGTLL 83
           +VV  A W     W     A  T +  VR +V  +AP V+G VTAV + DNQ V AG +L
Sbjct: 40  VVVVVAGWT----WARESGAASTDNAYVRGDVTSLAPKVAGYVTAVEVEDNQAVRAGDVL 95

Query: 84  FEVDRARYDLAVRQAQAALSAQRAM----------------SAQVQR------------- 114
           F +D   Y   + QA A + A  A                  A+ QR             
Sbjct: 96  FRIDDRDYRAKLAQAVANVEAAEARLTNVDAEMALQHALIRQAEAQRRSVVAELNLAAKA 155

Query: 115 ----------ENARNAGLDDLVSKESREQTR-----SRVEQMQ--------------AAV 145
                     E    A +D+  + +SR +       + VE  Q              AAV
Sbjct: 156 YDRRRELIRSETISQAHVDESDAAKSRAEANVLAASATVEAQQQRIAVLAAQREAAVAAV 215

Query: 146 AQAEVALDSAKLNLQRAEVRAPTSGLVTNLDLRQGSYAAAGRPVLALVDAQSFYVEGYFE 205
           AQAE A D A ++L+   VRAP  G++ N  +R G   A G  +L +V   + ++   F+
Sbjct: 216 AQAEAARDLAGIDLESTVVRAPVGGVIGNRQVRVGRLVAPGASLLDIVPLDNVWIVANFK 275

Query: 206 ETKLPRIHLGDRVRVTPMG-GGAVLEGAVDSVAAGIADHDRSTSANLLPSVNPTFNWVRL 264
           ET+L  I  G R  +T  G     LEG VDS A G       ++ +LLP+ N T N+VR+
Sbjct: 276 ETQLEHIRPGQRASITIDGYKSGALEGVVDSFAPG-----SGSAFSLLPADNATGNFVRV 330

Query: 265 AQRIPVRIKLDPLPQGARLVAGQTVTVQV 293
            QR+PV+I+    P   RL+ G +  V++
Sbjct: 331 VQRVPVKIRFAGNPLSGRLLPGLSARVEI 359