Pairwise Alignments

Query, 312 a.a., Tetrapartite efflux system, membrane fusion component FusE-like from Variovorax sp. SCN45

Subject, 354 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

 Score =  117 bits (292), Expect = 5e-31
 Identities = 98/327 (29%), Positives = 152/327 (46%), Gaps = 63/327 (19%)

Query: 18  RVLFTVLVVAAAVWAGLRLWDHYELAPWTRDGRVRANVVQIAPDVSGLVTAVPIRDNQPV 77
           ++ F ++ +   VW    LW    + P T D RV A +V++A +V+G +T V +RDNQ V
Sbjct: 10  KMSFYIIGLILVVWL-YSLWAD-RVTPMTSDARVHAYLVRVASEVAGNITEVSVRDNQIV 67

Query: 78  AAGTLLFEVDRARYDLAVRQAQAALS----------------AQRAMSAQVQRENAR--- 118
            AG  LF++D   Y LA++ AQA LS                  + + A   R NA+   
Sbjct: 68  EAGEPLFQIDPRNYRLAMQSAQANLSLAGQNIGASTAAVEVAQAKVVDAIAARNNAKEQA 127

Query: 119 -------------NAGLDDLVSKESREQTRSRVEQMQAAVAQAEVA-------------- 151
                         A LD+ +  E+R++T++ +E  +A++ QA  A              
Sbjct: 128 ARVSELAGQGVLSQAELDNAI--EARDRTQANLEAAEASLVQARQALGPAGQDNPQILAA 185

Query: 152 ---LDSAKLNLQRAEVRAPTSGLVTNLDLRQGSYAAAGRPVLALVDAQSFYVEGYFEETK 208
              L+ A+L+LQ+ +V+AP+ G+VTNL L  G  A  G P+L  +D +  ++     E  
Sbjct: 186 MANLEKAQLDLQKTQVKAPSKGVVTNLQLTLGQRANVGSPMLTFIDPRGVWISALVRENS 245

Query: 209 LPRIHLGDRVR-VTPMGGGAVLEGAVDSV---AAGIADHDRSTSANLLPSVNPTFNWVRL 264
           L  I +G++V  V     G VLEG VDS+     G  + D++T      S     N ++ 
Sbjct: 246 LEHIKVGNKVEIVLDALPGRVLEGKVDSIGWGTGGSNNIDQNTGFLTADS-----NGIK- 299

Query: 265 AQRIPVRIKLDPLPQGARLVAGQTVTV 291
           AQR PV I          +  G   TV
Sbjct: 300 AQRYPVNIVFTGTKPPGNIRYGSQATV 326