Pairwise Alignments

Query, 312 a.a., Tetrapartite efflux system, membrane fusion component FusE-like from Variovorax sp. SCN45

Subject, 343 a.a., multidrug transporter subunit MdtN from Klebsiella michiganensis M5al

 Score =  127 bits (318), Expect = 5e-34
 Identities = 104/332 (31%), Positives = 152/332 (45%), Gaps = 67/332 (20%)

Query: 19  VLFTVLVVAAAVWAGLRLWDHYELAPWTRDGRVRANVVQIAPDVSGLVTAVPIRDNQPVA 78
           VL  V+V+   +W         + AP T D    A+ + + P+VSG +  + + DNQ V 
Sbjct: 19  VLLAVVVLLVVIW-------RLDSAPATNDAYASADTIDVVPEVSGRIVELAVSDNQQVK 71

Query: 79  AGTLLFEVDRARYDLAVRQAQAALSA--------QRAMSAQ------VQ------RENAR 118
            G LLF +D   Y++ + +A+A+L+A        QR++ AQ      VQ      R  A+
Sbjct: 72  QGDLLFRIDPRTYEMNLAKAEASLAALDKQIMLTQRSVDAQKYGADSVQATVAKARAAAK 131

Query: 119 NAG----------LDDLVSKESREQTR---------------------SRVEQMQAAVAQ 147
            A            +  VS E  ++ R                     S V  + A VAQ
Sbjct: 132 QASDTLRRTEPLLKEGFVSAEDVDRARTAQRAAAADLNAVLLQAQQAASAVSGIDALVAQ 191

Query: 148 -----AEVALDSAKLNLQRAEVRAPTSGLVTNLDLRQGSYAAAGRPVLALVDAQSFYVEG 202
                A++AL   KL+L+ A VRAP  G V  L    G +A+A RP+  L+D + +YV  
Sbjct: 192 RVAVEADIAL--TKLHLEMATVRAPFDGRVVALKTSIGQFASAMRPLFTLIDTRHWYVIA 249

Query: 203 YFEETKLPRIHLGDRVRVTPMG-GGAVLEGAVDSVAAGIADHDRSTSANLLPSVNPTFNW 261
            F ET+L  IH G    +  M   G    G VDSV  G+   D       LP V+ + NW
Sbjct: 250 NFRETELKNIHTGTPATIRLMSDSGKTFAGKVDSVGYGVLPDDGGLVLGGLPRVSRSINW 309

Query: 262 VRLAQRIPVRIKLD-PLPQGARLVAGQTVTVQ 292
           VR+AQR PV+I +D P  +  R+ A    T++
Sbjct: 310 VRVAQRFPVKIMVDKPDAEMFRIGASAVATLE 341