Pairwise Alignments

Query, 492 a.a., Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like from Variovorax sp. SCN45

Subject, 472 a.a., Outer membrane protein OprN from Pseudomonas fluorescens FW300-N2E2

 Score =  267 bits (682), Expect = 7e-76
 Identities = 180/482 (37%), Positives = 254/482 (52%), Gaps = 17/482 (3%)

Query: 4   MTSFAFRLASLAAAAALAACAAVGPDYRQPPEALASQ-SAAGKPFAEAPANAAPLPPHWW 62
           M +F   L SL  AA LAAC  VGPDY+ P  A A+  S  G  + ++          WW
Sbjct: 1   MNAFKLFLPSLLVAA-LAACT-VGPDYKTPDTAPATVVSIQGGHYDQSRFETV-----WW 53

Query: 63  RLYHDPLLDKLVEQALAHNTDLRQAVANLERERAIEDEVAGAKYPSIG--VNGGPSYGHV 120
           + + DP L++LV ++L  N DLR A A  +  RAI D+V+    P +   V+     G V
Sbjct: 54  QQFDDPTLNQLVSKSLEGNRDLRVAFARWKAARAIRDDVSNDNLPVVTSRVSSQQGRGQV 113

Query: 121 SGLSLLQKGYEPPNTFNYSAGASLSYQVDLFGQIRRAIEASQASTQAAEAALDLVRVNVA 180
            G +  +   E      Y  G  ++++VDLFG+I+R +E+S A   AA A L  +RV + 
Sbjct: 114 PGQTESRVNQE-----RYDLGLDMAWEVDLFGRIQRQLESSDAQEDAAAADLYQLRVTMI 168

Query: 181 AGTARAYAEACSTGLRLRIAQKSVSLQQDAVNVTDRLQRAGRAGAIDAGRARAQLQQLNA 240
           A    AY +     LR +IA  ++  QQD+  VT  L+ AG    +D  RA A+L  + A
Sbjct: 169 AELVDAYGQLRGAQLREKIALANLKNQQDSRTVTVSLRDAGVGNELDVVRADARLAAVEA 228

Query: 241 ALPPLKAERQGALYRLATLTGALPQDFPREVADCSEPPRVAGTLPVGDGAALLRRRPDIR 300
            +P L+AE+     R+ATL G  P      ++  ++ P +A  LP+GD A LLRRRPD+ 
Sbjct: 229 TVPQLQAEQVRQKNRIATLLGERPNTLSVSLSP-AKLPAIAKALPIGDLAELLRRRPDVL 287

Query: 301 QAERSLAASTARIGVATADLYPKITL-GLSGSSVGHADGFGRKDTFAWSLGPLISWTVPN 359
            AER LA++TA IGVATADL+P+++L G  G + G     G     AWSLGP I+W   +
Sbjct: 288 AAERRLASATAEIGVATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSLGPSITWAAFD 347

Query: 360 TGVVQSHIAQAEAGTRAALAKFDGTVLTALRETETALATYARELDRRAALQASRDESAKV 419
            G V++ I  A+A    ALA ++  VL AL E+E A + Y +   R  +L    + S   
Sbjct: 348 LGSVRARIRGADANAEGALATYEQQVLLALEESENAFSDYGKRQQRLLSLIKQSESSRAA 407

Query: 420 AAQARQLYQNGRTGYLDSLDAERSLAASEAALAASEAQLSDDQIVLFMALGGGWEPADTN 479
           A  A   Y+ G   YL  LDAER    +E A A  E       + ++ ALGGGW     N
Sbjct: 408 ADLAAIQYKEGTVDYLVLLDAERERLNAEDAQALGETDQYRGIVAIYKALGGGWNSGGGN 467

Query: 480 LA 481
           +A
Sbjct: 468 VA 469