Pairwise Alignments

Query, 492 a.a., Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like from Variovorax sp. SCN45

Subject, 504 a.a., RND efflux system, outer membrane protein, NodT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  197 bits (501), Expect = 7e-55
 Identities = 156/499 (31%), Positives = 244/499 (48%), Gaps = 43/499 (8%)

Query: 10  RLASLAAAAALAACAAVGPDYRQP----PEALASQSA-AGKPFAEAPANAAPLPPHWWRL 64
           R+ ++   AAL +  A+GPDY++P    P A  ++SA AG    E           WW L
Sbjct: 4   RMTAMLLGAALLSGCAIGPDYQRPGMDLPSAWRAESADAGMVAGEK----------WWTL 53

Query: 65  YHDPLLDKLVEQALAHNTDLRQAVANLERERAIEDEVAGAKYPSIGVNGGPSYGHVSGLS 124
           + D  LD L E+ALA N DL  A+AN++  RA          PSI   G       S   
Sbjct: 54  FGDATLDALEEEALAANGDLATAMANVDASRAQLTVATSYLLPSITGQGSSVRQRGS--- 110

Query: 125 LLQKGYEPPN-----TFNYSAGASLSYQVDLFGQIRRAIEASQASTQAAEAALDLVRVNV 179
             ++G  PP      T  + A A  S+++DL+G+ RRA EA++A     EAA   VR+ V
Sbjct: 111 --ERGQNPPVEGREVTDLHKASALASFELDLWGKYRRAHEAARAGLLGTEAAYATVRLAV 168

Query: 180 AAGTARAYAEACSTGLRLRIAQKSVSLQQDAVNVTDRLQRAGRAGAIDAGRARAQLQQLN 239
            +  A++Y    +   +L IA+++++ +++++ + +    +G    +D  +A+A+     
Sbjct: 169 VSQVAQSYFGLRAADRQLDIARQTLTSREESLKIREARFNSGLTSELDYRQAQAETASAR 228

Query: 240 AALPPLKAERQGALYRLATLTGALPQDFPR-------EVADCSEPPRVAGTLPVGDGAAL 292
           A++  L+     A   L++L G  P+D          ++   + PP++   LP G    L
Sbjct: 229 ASVRQLEQAVAAAETALSSLLGRSPRDIVERSPERGLDIETFAVPPQIPAGLPAG----L 284

Query: 293 LRRRPDIRQAERSLAASTARIGVATADLYPKITL-GLSGSSVGHADGFGRKDTFAWSLGP 351
           L RRPD+ +AE  L  +TA IGVA ADL P I+L GL G             +  WS G 
Sbjct: 285 LARRPDVARAEADLHYATASIGVAKADLLPAISLTGLMGYESIDLTRLVSSSSGTWSYGA 344

Query: 352 LISWTVPNTGVVQSHIAQAEAGTRAALAKFDGTVLTALRETETALATYARE---LDRRAA 408
             +  + + G   ++I  A+A  RAALA ++  V  A RET+ AL    +    +D +A 
Sbjct: 345 SATMPLLDFGRTLANIDMADAKQRAALAAYEQAVRDAFRETQDALVANRKTRQVVDAQAT 404

Query: 409 LQASRDESAKVAAQARQLYQNGRTGYLDSLDAERSLAASEAALAASEAQLSDDQIVLFMA 468
             A+ + S  +   AR  Y+NG + YL+ LDAERSL  ++  L  +     D  + +  +
Sbjct: 405 QVAALERSLTL---ARLRYENGYSSYLEVLDAERSLFQAQLNLVEARRNQLDAVVQVCKS 461

Query: 469 LGGGWEPADTNLAQGAAAA 487
           LGGGW+      A    AA
Sbjct: 462 LGGGWKAPGEEGADATGAA 480