Pairwise Alignments

Query, 409 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

Subject, 402 a.a., drug resistance transporter, Bcr/CflA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  147 bits (370), Expect = 7e-40
 Identities = 114/378 (30%), Positives = 184/378 (48%), Gaps = 13/378 (3%)

Query: 11  RRPHAPLWLLALVTFSGTLAMHIFVPALPIAAANLGAGIGAMQMTVSLYIFGLAVGQLVY 70
           RR   P+ L++LV  S  LA+ I++P++P  AA        +Q T+ L++F + VGQ++ 
Sbjct: 2   RRNLLPI-LMSLVLLS-PLAIDIYLPSMPTMAAEFAVSASEVQSTLVLFLFAMGVGQILI 59

Query: 71  GPLADRFGRRPVLLCGLAIYCVAGLAAALAPEVHALITARLFQAIGGCAGLVLGRSIVRD 130
           GPLADR+GRRPV L G+ +Y  + L AA A E H L  AR+ Q +  C+  ++  S VRD
Sbjct: 60  GPLADRYGRRPVALFGVLLYGASSLLAAAAIEFHWLQIARVLQGLAACSTSIVVFSAVRD 119

Query: 131 TAEPQEATRRLALMNLMVTIGPSLAPLIGGALATALGWRSIFYALFGLGVVGFLFTWRML 190
              P+E  +  + +N  + + P+LAP +GG LA   GWRS F  +    ++  L     L
Sbjct: 120 CYSPKEGAKIYSYLNGAICVIPALAPTLGGLLAMQFGWRSTFVFMTLYAILMMLLVGYRL 179

Query: 191 PETGAPGAAVNARDLAR--NYGKLLRSPAFLGFSVGGGCATTSMYAFIASAPFIFVDQL- 247
           PET  P   V+   L R   Y  +L +  FL ++     A  ++ ++++ +P   +  L 
Sbjct: 180 PET-RPANTVSTGPLYRWSRYKPVLSNTHFLFYAFACMSAMAAILSYVSYSPVWLIGHLG 238

Query: 248 -HRPAHEAGIYLAILVSGVWLGSFLTSHLISRVRVDRLMIRSNALSV-AAAFVLLGAALG 305
               A      L  LV+ V    F    +I ++      I + AL V +A F++   A G
Sbjct: 239 VSELAFSGLFGLNALVNIV--ACFAAPVVIRKLGNRPTAILALALLVLSAVFIIAAQAFG 296

Query: 306 DHLSVPLIVAC---MFLFTVGAGMASPAALTQAISVNPQVIGSASGLYGFTQMAVGALCT 362
               +    A    M L  +G       A + A+S   +  G+A+ + GF QM+  ++  
Sbjct: 297 PSAGMAAAFAFMLPMMLLCIGFAFLLGPATSMALSAFGERAGTATAMLGFIQMSGASVIA 356

Query: 363 ALAGMGHRNPALASAIVL 380
            L    +     A A+V+
Sbjct: 357 GLVQQTNLTAPYAVALVM 374