Pairwise Alignments

Query, 317 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  121 bits (303), Expect = 2e-32
 Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 6/278 (2%)

Query: 24  LAVLATCWGASYTFIKIGVATIPPVTLIAARTLIAGALLLAVLRMRGVRLPKEPAMWGRF 83
           L  LA  WG S+ F++I   +  P  LI AR   A   L  V ++    LP     W  F
Sbjct: 9   LLCLAAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQH-WPHF 67

Query: 84  AVQACLNSVLPFTLIAWAERSVDAGLATILNSTSPIFIFLLGLGMGSAGRPTLQRFF-GV 142
            +   +N+ +PF L A+A  +++    +ILNST+PI+  ++G      G P  ++   G+
Sbjct: 68  LILGLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWH--GTPLSRKAVAGL 125

Query: 143 GAGLAGICLIVGLEALNGLGHSLLAQLALVAAAVCYGCAAMFGRVFKGLDPMVPAAGSML 202
             G++G+ +IVG + +    H+ L  +    AA  YG A  + +    L     A GSM 
Sbjct: 126 LLGVSGVAVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQAPQLSAFENAHGSMW 185

Query: 203 SGTAMLLPASLFIDRPWTLAPSAASVGAVLALAVLSTALAFTIYFRLIRTLGPMSTSAQA 262
           +    + P   F+  P    PS+   GAV+ L V+ T LA+ IYFRL++ +G  ST +  
Sbjct: 186 AACLWVAPLMWFV--PLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTLSVT 243

Query: 263 YLRVPIGVAIGVLFLGETLAPTAWIGLGCVVAGVVAMT 300
           +L    G+  G   L E +      G   V+AG + +T
Sbjct: 244 FLIPVFGILWGYWILDEPIGLNTLFGTLLVLAGTMLVT 281



 Score = 24.3 bits (51), Expect = 0.004
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 23  LLAVLATCWGASYTFIKIGVATIPPVTLIAARTLIAGALLLAVLRMRGVRLPKEP 77
           L+ V    WG       IG+ T+    L+     +AG +L+    +R  RL ++P
Sbjct: 245 LIPVFGILWGYWILDEPIGLNTLFGTLLV-----LAGTMLVTGFSLRNARLSRQP 294