Pairwise Alignments

Query, 317 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 56.2 bits (134), Expect = 9e-13
 Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 25/270 (9%)

Query: 48  VTLIAARTLIAGALLLAVLRMRGVRLP------KEPAMWGRFAVQACLNSVLPFTLIAWA 101
           VT +  R LIAG +L   L+ + + L        E   +G F     LN+V  +     A
Sbjct: 35  VTTLMFRFLIAGLILYVFLKFKKISLKISRHNFVEILFYGAFLY--ALNTVFLYE----A 88

Query: 102 ERSVDAGLATILNSTSPIFIFLLGLGMGSAGRPTLQRFFGVGAGLAGICLIVGLEALNG- 160
              +  G+AT L+   P+ + LL + +        +   G+   LA I   +G+  L G 
Sbjct: 89  YNYIPTGIATTLHFIYPVTVTLLMISI-------FKENLGINKVLALIFSFLGMYCLLGG 141

Query: 161 --LGHSLLAQLALVAAAVCY-GCAAMFGRV-FKGLDPMVPAAGSMLSGTAMLLPASLFID 216
              G  +   L    + + Y G     G+  +  +D  V      +  + +L    LF +
Sbjct: 142 NCAGFDIYGVLLAAGSGLVYAGYIVSAGKCKYSKIDSYVTIFYLSILSSVLLFIYGLFTN 201

Query: 217 RPWTLAPSAASVGAVLALAVLSTALAFTIYFRLIRTLGPMSTSAQAYLRVPIGVAIGVLF 276
              TL  + +S  ++  +++  T LA   +   I+ +GP +T+  + L   + + +G+L 
Sbjct: 202 T-LTLNMAFSSYASIGLISIFCTVLALIAFLEGIKLIGPSNTAILSTLEPIVSIILGILL 260

Query: 277 LGETLAPTAWIGLGCVVAGVVAMTMPEAKL 306
           L E L+    +G   V+  V+ +T+ ++K+
Sbjct: 261 LNEVLSFKIGLGSVLVLISVIIVTIEKSKV 290