Pairwise Alignments

Query, 329 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  168 bits (426), Expect = 1e-46
 Identities = 106/300 (35%), Positives = 161/300 (53%), Gaps = 12/300 (4%)

Query: 14  NRMLPGTRALRTFEAAARHLNFTRAADEVGLTPAAVSYQIKELEDQLGVVLFTRTSRSIQ 73
           +R LP   +L+ FEAAARHL+FTRAA+E+ +T AAVS+QIK LE+ LG+ LF R +RS+ 
Sbjct: 2   SRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLL 61

Query: 74  LTPAGAVMFEATADALDTLHRAAGRARRLTRNAAHLRVSLSARFATNWLLPRLPKFRAAN 133
           LT  G   F    D   +L  A  +    +   A L +SL   FA  WL+PRL  F    
Sbjct: 62  LTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGA-LTISLPPSFAIQWLVPRLADFNQQE 120

Query: 134 PGLELSFDISDELRDFEADDIDVAIRFGTGRYEGARADRLFELDIVPVCSPRLIETGPPL 193
           P +++     D       DD+DVAI +G G + G RAD+L++  ++P+CSP L+    P+
Sbjct: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180

Query: 194 NEPRDLVRHNHTLCYVDWKTDTMTWPNWRMWMAAAGVDDDFDDSRCVAFSDSGYVVQAVL 253
            +  DL    HTL +   + D      W+ +    G+ D+ + +    FS S  V+QA  
Sbjct: 181 EKLSDLA--YHTLLHDTSRKD------WKQFAKENGL-DNVNVNHGPIFSHSTMVLQAAA 231

Query: 254 EGGAVGLADLDMIEADLKQGRLVRLFDVGVSMAPTYAYHLVYPQGYGEDARVVAFREWML 313
            G  V L +  + + ++  GRL+  FD    +    A+++V  +   +  R+  FR+WML
Sbjct: 232 HGQGVALGNNVLAQPEIDAGRLIAPFD--EVLMTNNAFYVVCHEKQADMGRIATFRDWML 289