Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 302 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  160 bits (406), Expect = 3e-44
 Identities = 97/284 (34%), Positives = 155/284 (54%), Gaps = 2/284 (0%)

Query: 2   LKLSLEAIEVVDAIARHGSFAAAATRLNKVPSTISYAVGKLEEQLGMLLFERNGPRVTLT 61
           +  S  ++E++DA+AR GSF AAA  L+KVPS ISY+V ++E +LG++LF R   +V LT
Sbjct: 1   MMFSKSSLEMLDAVARLGSFTAAAEVLHKVPSAISYSVRQIESELGVVLFRRLPRKVELT 60

Query: 62  PAGEEMLKEGRWLLGAASDLESRMRQIATGYESELRLVHDSLIPTQALIDDIRAFEDLRC 121
           PAGE  + E R LL    ++ ++ ++ A G+   L++  D+++    +   + AF     
Sbjct: 61  PAGELFMLEARQLLRQMEEIRAQTKRAAHGWRKTLKVTLDNVVKLDKMKPMVEAFYQTFD 120

Query: 122 GTRLRIGCEALTGSWEALREGRADIVIAAGDG-PAGGGYQAVTVGSLDFAFCVAPSHPLT 180
              L+I  E   GSWEA+ +GRADIVI A    P GG ++   +G LD+AF ++P+HP  
Sbjct: 121 FAELQINMEVFNGSWEAIAQGRADIVIGATAAVPVGGDFEVRDMGILDWAFVMSPNHPCV 180

Query: 181 RLGRPLQRGDLLECNAIVVGDSARTLSERTVGLLAGQPRITVPSMPAKIACQVAGLGHGF 240
           R  + L  G + +  AI + D++  L +R       Q R+ +P+  + I    +GLG G+
Sbjct: 181 R-EQNLSEGFISQFLAICLDDTSSVLPKRHTEHYPKQRRLLLPNWYSAIESLKSGLGVGY 239

Query: 241 LPRACILGELKRGTLVELPTEEPRPPEAFWLAWKTGAQGQALRW 284
           +PR      L  G LVE    + +      L W+     + + W
Sbjct: 240 MPRHMAQPLLASGQLVEKVLPDEKLLSHCCLVWRKDDNHKLIEW 283