Pairwise Alignments

Query, 338 a.a., Site-specific tyrosine recombinase XerC from Variovorax sp. SCN45

Subject, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (532), Expect = 7e-59
 Identities = 128/324 (39%), Positives = 190/324 (58%), Gaps = 20/324 (6%)

Query: 15  TPAVSAASGWVEKYLEHVRVERRLAARTVELYAFHLKSLTDHAAEAKLS-LDHVQTAHIR 73
           TP   A +  +E++  ++  E+ L+  T   Y   L+++T +  +  L+    + +A +R
Sbjct: 7   TPLPDALAQPLERFYAYLHTEKGLSLYTQRNYKQQLETMTQYLVQVGLTHWTQLDSAWVR 66

Query: 74  RWMAQLHAAGREPRGIALVLSCWRSFYRWLGHEGLVGFNPVQDVHAPKAGKPLPKALGVD 133
           + + Q    G +   IA  LS  RSF  +L   G +  NP + V AP+  + LPK L VD
Sbjct: 67  QLVMQGKRQGMKASSIATRLSSLRSFLDFLILRGELQANPAKGVSAPRKQRTLPKNLDVD 126

Query: 134 DAVRLAELYDPEADPWTEARDSAIVEMLYGCGLRVSELTGLDAQASSSARGWVDLDAGDA 193
           +  +L E+ D   DP +  RD AI+E++YG GLR++EL  +D +        V+L  G+ 
Sbjct: 127 EMAQLLEVTDD--DPLS-IRDRAIMELMYGAGLRLAELVSIDIKD-------VNLSEGEI 176

Query: 194 NVLGKGSKRRIVPMGSKASEAVRDWLAVRGDCAALATSHLRDPRAAAALFISAKGVRMSS 253
            V+GKG+K R V    +A E V  WL +R   A           A  ALF+S  G R+S 
Sbjct: 177 RVIGKGNKERKVWFAGQAQEWVGKWLKLRSQLA---------DSAETALFVSKLGTRISH 227

Query: 254 QAVWKLLRERSLKAGLAAPVHPHMLRHSFASHVLQSSSDLRAVQELLGHASISTTQVYTR 313
           ++V K + E   K  +A+ + PH LRHSFA+H+L+SS++LRAVQELLGH +I+TTQ+YT 
Sbjct: 228 RSVQKRMAEWGQKQAVASHISPHKLRHSFATHMLESSNNLRAVQELLGHENIATTQIYTH 287

Query: 314 LDFQHLAKVYDAAHPRAKAKPEND 337
           LDFQHLA+VYD AHPRA+ K ++D
Sbjct: 288 LDFQHLAQVYDQAHPRARKKNKDD 311