Pairwise Alignments

Query, 338 a.a., Site-specific tyrosine recombinase XerC from Variovorax sp. SCN45

Subject, 330 a.a., site-specific tyrosine recombinase XerC from Sinorhizobium meliloti 1021

 Score =  165 bits (417), Expect = 2e-45
 Identities = 112/311 (36%), Positives = 162/311 (52%), Gaps = 24/311 (7%)

Query: 27  KYLEHVRVERRLAARTVELYAFHLKS----LTDH-AAEAKLS-LDHVQTAHIRRWMAQLH 80
           ++L  +  ERRL+ +TV+ Y    +     LT H A   +LS +  ++ A +R ++AQ  
Sbjct: 37  RWLASLAEERRLSEKTVDAYERDTRQFLTFLTGHLAGPPRLSDICALRPADLRGFLAQRR 96

Query: 81  AAGREPRGIALVLSCWRSFYRWLGHEGLVGFNPVQDVHAPKAGKPLPKALGVDDAVRLAE 140
             G   R +   L+  RSF R+L   GL        V +PK  K LPKAL   +A+++  
Sbjct: 97  KGGAGARTLGRGLAGLRSFLRYLERNGLANAAGAGAVRSPKQPKSLPKALTDREALKVVT 156

Query: 141 LYDPEAD-PWTEARDSAIVEMLYGCGLRVSELTGLDAQASSSARGWVDLDAGDANVLGKG 199
                A+ PW  AR++A++ +LYGCGLR++E   L     S              V GKG
Sbjct: 157 ADAQLAEEPWIAARNAAVLTLLYGCGLRIAEALDLTPADFSGP-------VTSLRVTGKG 209

Query: 200 SKRRIVPMGSKASEAVRDWLAVRGDCAALATSHLRDPRAAAALFISAKGVRMSSQAVWKL 259
            K RIVPM + A+EAV  +         L   H+        +F  A+G ++    + + 
Sbjct: 210 GKTRIVPMIAAAAEAVETY-------RKLCPYHIEPEEP---IFRGARGAKLQPAIIQRE 259

Query: 260 LRERSLKAGLAAPVHPHMLRHSFASHVLQSSSDLRAVQELLGHASISTTQVYTRLDFQHL 319
           +++     GL     PH LRHSFA+H+L    DLR +QELLGHAS+STTQVYT +D   L
Sbjct: 260 MQKLRAALGLPDSATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDSARL 319

Query: 320 AKVYDAAHPRA 330
            ++YD AHPRA
Sbjct: 320 LEIYDRAHPRA 330