Pairwise Alignments

Query, 338 a.a., Site-specific tyrosine recombinase XerC from Variovorax sp. SCN45

Subject, 329 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

 Score =  112 bits (280), Expect = 1e-29
 Identities = 87/315 (27%), Positives = 142/315 (45%), Gaps = 36/315 (11%)

Query: 30  EHVRVERRLAARTVELYAFHLKSLTDHAAE------AKLSLDHVQTAHIRRWMAQLHAA- 82
           EH+  ERR +  T + YA+  + L   AA         L ++ +    I  ++  +    
Sbjct: 14  EHLPRERRASVHTCDAYAYSFQLLVTFAARRLSKRPCLLQIEDIDVPMILAFLEHIEETR 73

Query: 83  GREPRGIALVLSCWRSFYRWLGHEGLVGFNPVQDVHA---PKAGKPLPKALGVDDAVRLA 139
           G + R     L+  +SF+R+L H      +    VHA    K  + L  +L   +   L 
Sbjct: 74  GNKARSRNARLAAVKSFFRYLEHRVPAVLDQALRVHAMPMKKIDEALVASLSRTEVQAL- 132

Query: 140 ELYDPEADPWTEARDSAIVEMLYGCGLRVSELTGLDAQASSSARGWVDLDAGDANVLGKG 199
            L  P+    +  RD A++ + +  GLRVSEL GL                   +++GKG
Sbjct: 133 -LNAPDRRSLSGIRDRAMLHLAFAGGLRVSELVGLTLDQFDGR------SPASIHIIGKG 185

Query: 200 SKRRIVPMGSKASEAVRDWLAVRGDCAALATSHLRDPRAAAALFISAKGVRMSSQAVWKL 259
            + R++P+  + + A+R W+AVR                  ALF++  G  M+      +
Sbjct: 186 RRERVLPLWQETAAAIRAWIAVR------------PKNGDTALFLNNAGRMMTRSGFEYI 233

Query: 260 LRERSLKAGLAAP------VHPHMLRHSFASHVLQSSSDLRAVQELLGHASISTTQVYTR 313
           L + +  A   AP      + PH+LRHS A H+LQ++ D+R V   LGHAS+ +T++Y R
Sbjct: 234 LEKHAAAAVSVAPTLATKSISPHVLRHSCAMHMLQATRDIRKVALWLGHASLQSTEIYLR 293

Query: 314 LDFQHLAKVYDAAHP 328
            D     ++ DA  P
Sbjct: 294 ADPTEKLEMLDALAP 308