Pairwise Alignments

Query, 404 a.a., 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) from Variovorax sp. SCN45

Subject, 708 a.a., ribosomal RNA large subunit methyltransferase K/L from Vibrio cholerae E7946 ATCC 55056

 Score = 58.2 bits (139), Expect = 8e-13
 Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 27/240 (11%)

Query: 112 VDRYGDTLVAQFLSAGV----ERWKDVLADALLKATGLAKLYERSDASGREREGLKPVTG 167
           +D Y D L+ Q  +A      E+ K  L D +  A  +  + + ++   + RE  K  + 
Sbjct: 437 IDVYQDHLMIQEYAAPKDIPEEKAKRRLTDIIRAAIQVLDV-DANNVVLKVRERQKGTSQ 495

Query: 168 WLR-GDGPTEIVIREHGWKLSLDIATGHKTGFYLDQRDSRQRFAELAQHRRFRRVLNCFC 226
           + + G     + I E+G KL +++     TG +LD + +R+R  ++AQ + F   LN F 
Sbjct: 496 YEKLGQQAQTMQITEYGVKLIVNLYDYLDTGLFLDHKITRRRLGQMAQGKDF---LNLFA 552

Query: 227 YTGGFTV-AALAGLKAANALQGAQLVSVDSSLPALERARGHLALNGFEGQGIEAEFLDAN 285
           YTG  TV AA  G K+          +VD S   LE A+ ++ LNG  G+  + +++ A+
Sbjct: 553 YTGSATVHAACGGAKST--------TTVDMSKTYLEWAKENMQLNGQVGR--QHQYVQAD 602

Query: 286 VNTVLREFIDQGRTFDAIVLDPPKFAPTAAHAERAARAYKDINRLAL---KLLEPGGVLL 342
               L+   +    +D I +DPP F+  +   E+     +D   L     +LL P G ++
Sbjct: 603 ---CLQWLANAQSQYDLIFIDPPTFS-NSKRMEQTFDVQRDHVTLMTNLKRLLRPEGTIV 658