Pairwise Alignments

Query, 404 a.a., 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) from Variovorax sp. SCN45

Subject, 338 a.a., conserved hypothetical protein from Pseudomonas syringae pv. syringae B728a

 Score = 60.1 bits (144), Expect = 9e-14
 Identities = 80/321 (24%), Positives = 125/321 (38%), Gaps = 55/321 (17%)

Query: 94  SDGVRVVHGEADGLPGLIVDRYGDTLVAQFLSAGVERWKDVLADALL-------KATGLA 146
           +D  R+ HG  +G  GL +DRYG  L+ Q     ++R      DALL          GL 
Sbjct: 27  TDCYRLFHGSQEGASGLTIDRYGPQLLVQSFHTRLDR------DALLALHEQVNTRLGLD 80

Query: 147 KLYERSDASGREREGLKPVTGWLRGDGPTEIVIREHGWKLSLDIA---TGHKTGFYLDQR 203
            L   +D S       +  T +   D      +  H W L+  +     G     +LD R
Sbjct: 81  TLLVYNDRSQGNSRVDRHDTVYKAEDAALADHV-GHEWGLNYRVRGRHAGQDPLLFLDLR 139

Query: 204 DSRQRFAELAQHRRFRRVLNCFCYTGGFTVAALAGLKAANALQGAQLVSVDSSLPALERA 263
           ++R     + QH   + VLN F YT G  ++A AG        GA      S +  L+ A
Sbjct: 140 NTR---GWVKQHSAGKSVLNLFAYTCGVGLSAAAG--------GA------SEVCNLDFA 182

Query: 264 RGHLALNGFEG----QGIEAEFLDANVNTVLREFID-----------------QGRTFDA 302
            G+LA+    G    Q    +F+ ++    +R+                    Q R +D 
Sbjct: 183 EGNLAVGRENGALNPQLPPMQFIQSDYFPAIRQLAGLPIAARRSQQLPSYVKLQQRQYDL 242

Query: 303 IVLDPPKFAPTAAHAERAARAYKDINRLALKLLEPGGVLLTFSCSGGISADLFHKIVASA 362
           ++LDPP +A +A       R Y+ + + AL      GVL+  +    +S   + + V   
Sbjct: 243 VLLDPPAWAKSAFGTVDLLRDYQSLLKPALLTTADDGVLICCNNLAKVSMQDWREQVLRC 302

Query: 363 GIDAGVDGYIAERLGAAPDHP 383
              AG      + +  A D P
Sbjct: 303 ATKAGRPVRDCQEMRPAADFP 323