Pairwise Alignments

Query, 404 a.a., 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) from Variovorax sp. SCN45

Subject, 711 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 67.0 bits (162), Expect = 2e-15
 Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 19/170 (11%)

Query: 176 EIVIREHGWKLSLDIATGHKTGFYLDQRDSRQRFAELAQHRRFRRVLNCFCYTGGFTV-A 234
           E++  E+G K  L++     TG +LD R +R+    + Q  + RRVLN F YTG  +V A
Sbjct: 507 ELITTEYGAKFKLNLTGYLDTGLFLDHRLTRRL---VGQKSKGRRVLNLFSYTGSASVHA 563

Query: 235 ALAGLKAANALQGAQLVSVDSSLPALERARGHLALNGFEGQGIEAEFLDANVNTVLREFI 294
           AL G K+        + +VD S   L  A+ + ALN   G+  + EF+ A+    +R+  
Sbjct: 564 ALGGAKS--------VTTVDMSNTYLAWAKENFALNNLSGK--QYEFVQADCLQWIRDCN 613

Query: 295 DQGRTFDAIVLDPPKFAPTAAHAER--AARAYKDINRLALKLLEPGGVLL 342
           +Q   +D I +DPP F+ +    +     R + ++  + +KLL P G L+
Sbjct: 614 EQ---YDLIFIDPPTFSNSKRMEDSFDVQRDHVNLLGMLIKLLSPNGELV 660