Pairwise Alignments

Query, 224 a.a., DksA family protein PA5536 (no Zn-finger) from Variovorax sp. SCN45

Subject, 148 a.a., RNA polymerase-binding transcription factor DksA from Vibrio cholerae E7946 ATCC 55056

 Score =  111 bits (278), Expect = 6e-30
 Identities = 53/121 (43%), Positives = 78/121 (64%)

Query: 100 PDDEYMNEKQMAFFRLKLEELKRGILENAGETTEHLREDTVVVPDPADRATIEEEHALEL 159
           P +EYM+  Q+  F   LE  +  + E    T  H++++    PDP DRA+ EEE +LEL
Sbjct: 24  PGEEYMSPGQITHFTKILEAWRNQLREEVDRTVHHMQDEAANFPDPVDRASQEEEFSLEL 83

Query: 160 RTRDRERKLLKKIEQSIQRIDAGDYGYCDETGEPIGVGRLLARPTATLSLEAQQRRELKQ 219
           R RDRER+L+KKIE+++ +I   D+GYC+  G  IG+ RL ARPTA L ++ +   E+K+
Sbjct: 84  RNRDRERRLIKKIEKTLDKIKEEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIKE 143

Query: 220 K 220
           K
Sbjct: 144 K 144