Pairwise Alignments

Query, 442 a.a., ATP-dependent hsl protease ATP-binding subunit HslU from Variovorax sp. SCN45

Subject, 427 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Pseudomonas fluorescens FW300-N2E2

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 42/251 (16%)

Query: 4   TPQEIVSELDNHIVGQPAAKRAVAIALRNRWRRQQVDDKLRHEIT--PKNILMIGPTGVG 61
           +P+EI   LD +++GQ  AK+ +A+A+ N ++R    DK   E+     NIL+IGPTG G
Sbjct: 67  SPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKNDEVELGKSNILLIGPTGSG 126

Query: 62  KTEIARRLARLADAPFIKVEATKFTEVGYVGKDVDSIIRDL----------AEIAV---- 107
           KT +A  LARL + PF   +AT  TE GYVG+DV++II+ L          A++ +    
Sbjct: 127 KTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQMGIVYID 186

Query: 108 ---KQTRESESAKVRARAEDAAEERILDVLLPPARGADGAPPALDAPNPTRQAFRKKLRE 164
              K +R+S++  +     D + E +   LL    G   + P        +Q F +    
Sbjct: 187 EIDKISRKSDNPSI---TRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQ---- 239

Query: 165 HQLDDKEIELDLAETRTPLEIMGPA--GMEEMTE--QLRGMFGQMGQGKRKTRKLKIGEA 220
                        +TR  L I G A  G+E++ +    RG  G   + + K    K+GE+
Sbjct: 240 ------------VDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEGKKVGES 287

Query: 221 MRLLVDEEAAK 231
           +R +  ++  K
Sbjct: 288 LREVEPDDLVK 298



 Score = 81.3 bits (199), Expect = 6e-20
 Identities = 85/322 (26%), Positives = 138/322 (42%), Gaps = 74/322 (22%)

Query: 163 REHQLDDKEIELDLAETRTPLEIMGPAG-----MEEMTEQLRGMFGQMGQGKRKTRKLKI 217
           R +Q D K  E++L ++   + ++GP G     + E   +L  +   +      T    +
Sbjct: 99  RLNQRDKKNDEVELGKSN--ILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYV 156

Query: 218 GEAMRLLVDEEAAKLVNEDEIRAQAITNAEQNGIVFIDEIDKVATRSEAQG--SDVSRQG 275
           GE +  ++ +   K   + E          Q GIV+IDEIDK++ +S+      DVS +G
Sbjct: 157 GEDVENIIQKLLQKCDYDVE--------KAQMGIVYIDEIDKISRKSDNPSITRDVSGEG 208

Query: 276 VQRDLLPLVEGTAVTT-----------KYGVVRTDHMLFIASGAFH-LSK---------- 313
           VQ+ LL L+EGT  +            ++  V T ++LFI  GAF  L K          
Sbjct: 209 VQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGG 268

Query: 314 ------------------------PSDL-----IPELQGRFPIRVELQSLSVSDFESILT 344
                                   P DL     IPE  GR P+   L  L  +    ILT
Sbjct: 269 IGFNAEVRSKEEGKKVGESLREVEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILT 328

Query: 345 QTRASLVKQYQALLATEGVTLDFTPEGVNRLATIAFEVNERTENIGARRLSTVMERLLDE 404
           + + +L KQY  L   EGV L+F  + +  +A  A E        GAR L +++E +L +
Sbjct: 329 EPKNALTKQYAKLFEMEGVDLEFRSDALKSVAKRALE-----RKTGARGLRSILEGVLLD 383

Query: 405 VSFD-ATRLEGQSIRIDAAYVD 425
             ++  ++ E   + ID + ++
Sbjct: 384 TMYEIPSQSEVSKVVIDESVIE 405