Pairwise Alignments

Query, 442 a.a., ATP-dependent hsl protease ATP-binding subunit HslU from Variovorax sp. SCN45

Subject, 422 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Phaeobacter inhibens DSM 17395

 Score = 97.4 bits (241), Expect = 7e-25
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 43/251 (17%)

Query: 4   TPQEIVSELDNHIVGQPAAKRAVAIALRNRWRRQQVDDKLRH--EITPKNILMIGPTGVG 61
           TP++I   LD++++GQ  AKR +++A+ N ++R     K     E++  NIL+IGPTG G
Sbjct: 65  TPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQKAGSDIELSKSNILLIGPTGCG 124

Query: 62  KTEIARRLARLADAPFIKVEATKFTEVGYVGKDVDSIIRDLAEIAV-------------- 107
           KT +A+ LAR+ D PF   +AT  TE GYVG+DV++II  L + +               
Sbjct: 125 KTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYID 184

Query: 108 ---KQTRESESAKVRARAEDAAEERILDVLLPPARGADGAPPALDAPNPTRQAFRKKLRE 164
              K TR+SE+  +     D + E +   LL    G   + P        +Q F +    
Sbjct: 185 EVDKITRKSENPSI---TRDVSGEGVQQALLKLMEGTVASVPPQGGRKHPQQEFLQ---- 237

Query: 165 HQLDDKEIELDLAETRTPLEIMGP--AGMEEMTEQLRGMFGQMGQGK--RKTRKLKIGEA 220
                        +T   L I G   AG++++ +Q RG    MG G   R      +GE 
Sbjct: 238 ------------VDTTNILFICGGAFAGLDKIIKQ-RGKGSAMGFGADVRDDSDAGVGET 284

Query: 221 MRLLVDEEAAK 231
            + L  E+  K
Sbjct: 285 FKDLEPEDLLK 295



 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 86/306 (28%), Positives = 131/306 (42%), Gaps = 74/306 (24%)

Query: 160 KKLREHQLDDKEIELDLAETRTPLEIMGPAG-----MEEMTEQLRGMFGQMGQGKRKTRK 214
           K+L   Q    +IEL    +++ + ++GP G     + +   ++  +   M      T  
Sbjct: 96  KRLNHAQKAGSDIEL----SKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEA 151

Query: 215 LKIGEAMRLLVDEEAAKLVNEDEIRAQAITNAEQNGIVFIDEIDKVATRSEAQG--SDVS 272
             +GE +  ++     KL+   E   +      Q GIV+IDE+DK+  +SE      DVS
Sbjct: 152 GYVGEDVENII----LKLLQASEYNVERA----QRGIVYIDEVDKITRKSENPSITRDVS 203

Query: 273 RQGVQRDLLPLVEGTAVTT-----------KYGVVRTDHMLFIASGAFH-LSK------- 313
            +GVQ+ LL L+EGT  +            ++  V T ++LFI  GAF  L K       
Sbjct: 204 GEGVQQALLKLMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGK 263

Query: 314 --------------------------PSDL-----IPELQGRFPIRVELQSLSVSDFESI 342
                                     P DL     IPE  GR P+   L+ L      +I
Sbjct: 264 GSAMGFGADVRDDSDAGVGETFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITI 323

Query: 343 LTQTRASLVKQYQALLATEGVTLDFTPEGVNRLATIAFEVNERTENIGARRLSTVMERLL 402
           LT+ + +LVKQYQ L   E   LDFT E ++ +A  A E        GAR L +++E +L
Sbjct: 324 LTKPKNALVKQYQRLFELEDTELDFTEEALSSIAKKAIE-----RKTGARGLRSILEDIL 378

Query: 403 DEVSFD 408
               F+
Sbjct: 379 LNTMFE 384