Pairwise Alignments

Query, 307 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase (EC 2.1.1.199) from Variovorax sp. SCN45

Subject, 304 a.a., S-adenosyl-methyltransferase mraW (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  191 bits (484), Expect = 2e-53
 Identities = 123/302 (40%), Positives = 173/302 (57%), Gaps = 12/302 (3%)

Query: 7   HTTVLLNEAVEALLSGSTAATGTYVDATFGRGGHARAILSRLAPEGRLIAFDKDAEAVAE 66
           H  VLL E+V+ +   +    GTYVD TFG  GH+R ILSRL   GRL+ FD+D +A  E
Sbjct: 9   HVPVLLKESVDGM---NIHPDGTYVDVTFGGAGHSREILSRLGEGGRLLGFDQDEDA--E 63

Query: 67  AARISDARFSIRHQGFRSLGEL----PDASIDGLLMDLGVSSPQIDNPVRGFSFRFDGPL 122
              ++D  F+     FR L           +D +L DLGVSS   D+  RGFSFRFDG L
Sbjct: 64  RNIVNDPHFTFVRSNFRYLQNFLRYHDIEQVDAILADLGVSSHHFDDSERGFSFRFDGAL 123

Query: 123 DMRMDTTRGESVAEWLATAELQQIAEVIRDYGEERFAVQIAKAIVARRQERGPISTTTEL 182
           DMRM+   G + A+ + T E +++A +   YGE + + ++A AIV  R  +  I T  E 
Sbjct: 124 DMRMNKRAGLTAADIVNTYEEERLANIFYLYGELKNSRKLASAIVKARNGQS-IRTIGEF 182

Query: 183 AELVAGTVKTREQGQNPATRTFQAFRIFINAELEELQQALEASLSVLKPGGRLAVISFHS 242
            E++   +  RE+ +    + FQA RI +N E+E L++ L A+   LKPGGRL VI++HS
Sbjct: 183 LEIIK-PLFGREREKKELAKVFQALRIEVNQEMEALKEMLAAATEALKPGGRLVVITYHS 241

Query: 243 LEDRIVKQFIAKHSKEVYDRRAPFAAPKV-MKLNALERIKPSQAEVSGNPRSRSAILRVA 301
           LEDR+VK  +   + E       F   +   +L   + I P +AE+  NPRSRSA LR+A
Sbjct: 242 LEDRMVKNIMKTGNVEGKAETDFFGNLQTPFRLVNNKVIVPDEAEIERNPRSRSAKLRIA 301

Query: 302 ER 303
           E+
Sbjct: 302 EK 303