Pairwise Alignments

Query, 518 a.a., UDP-N-acetylmuramoyl-dipeptide--2,6-diaminopimela te ligase (EC 6.3.2.13) from Variovorax sp. SCN45

Subject, 463 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase from Synechococcus elongatus PCC 7942

 Score = 52.0 bits (123), Expect = 5e-11
 Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 15/179 (8%)

Query: 215 VAVFTNFTQDHLDYHGSMDAYWQAKAELFRWPGLRAAVINIDDTHGASLCANLIDAGIGA 274
           + ++T FT DHL+ H +++ Y+  KA L      +  V+N DD +   L           
Sbjct: 185 IGLWTTFTPDHLNRHYTLENYFTIKASLL--DRAQQQVLNGDDPY---LRNQANATSRWP 239

Query: 275 LDVWTVSAGGKPARLVARDIGYDAQGLQFSVAEHGTA--AVERLSTGLIGQYNVANLLGV 332
           L  WT S  G  A   +RD G+  +  +  V + G     VER S  ++G +N  NLL  
Sbjct: 240 LAFWT-STQGAEALPTSRDRGFWIE--EGWVIDRGDRLFPVERFS--MVGNHNQQNLLMA 294

Query: 333 LGTLRALGLTLAQAAAACANLTSVPGRMDRAGTGDGAPLAVVDYAHTPDALDKALIGLR 391
           +   R  G+     A A AN   +  R++R  T  G  L     A   DA   A +GL+
Sbjct: 295 VAAARLAGIEAEAIAEAMANFPGIAHRLERVATWQGIELINDSKATNYDA---AWVGLQ 350