Pairwise Alignments

Query, 182 a.a., Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) from Variovorax sp. SCN45

Subject, 173 a.a., crossover junction endodeoxyribonuclease RuvC from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (392), Expect = 4e-43
 Identities = 84/175 (48%), Positives = 114/175 (65%), Gaps = 5/175 (2%)

Query: 3   ILGIDPGLQTTGFGVVDADGHALRYVASGTISTRHLGTGNLPARLKVLFDGIAEIAARYQ 62
           ILGIDPG + TG+GV+   G  L Y+ SG I T  L    LP RLK ++ G++EI  ++Q
Sbjct: 4   ILGIDPGSRVTGYGVIRQQGRHLIYLGSGCIRTSDL---ELPLRLKQIYAGVSEIITQFQ 60

Query: 63  PDASAVEIIFVNVNPQSTLLLGQARGACVTSLVNSNLSVAEYTALQMKKAVAGHGQAAKA 122
           PDA A+E +F+  N  S L LGQARG+ + + VN+ L V EY A  +K+AV G G A K+
Sbjct: 61  PDAFAIEQVFMAKNADSALKLGQARGSAIVAAVNAELPVYEYAARLIKQAVVGTGAADKS 120

Query: 123 QVQEMVKRLLDLPGLPGADAADALGIAITHAQVGRSMARLAEAAELSKTHAGTYR 177
           QVQ MV+++L LPG P ADAADALG+AI HA   +++  +A A + +    G YR
Sbjct: 121 QVQHMVQQMLKLPGKPQADAADALGVAICHANTNKTL--IALAGQATSARRGRYR 173