Pairwise Alignments

Query, 182 a.a., Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) from Variovorax sp. SCN45

Subject, 173 a.a., crossover junction endodeoxyribonuclease RuvC (RefSeq) from Shewanella loihica PV-4

 Score =  159 bits (401), Expect = 3e-44
 Identities = 85/175 (48%), Positives = 116/175 (66%), Gaps = 5/175 (2%)

Query: 3   ILGIDPGLQTTGFGVVDADGHALRYVASGTISTRHLGTGNLPARLKVLFDGIAEIAARYQ 62
           ILG+DPG + TG+GV+   G    Y+ SG I T+   + +LP+RLKV+FDGI+EI  +YQ
Sbjct: 4   ILGVDPGSRITGYGVIQCQGRQQIYLGSGCIRTQ---SDDLPSRLKVIFDGISEIIRQYQ 60

Query: 63  PDASAVEIIFVNVNPQSTLLLGQARGACVTSLVNSNLSVAEYTALQMKKAVAGHGQAAKA 122
           PD  A+E +F+  N  S L LGQARGA + +  N+ L VAEY+A Q+K AV G G+A K+
Sbjct: 61  PDEFAIERVFLAKNADSALKLGQARGAAIVAATNAQLPVAEYSATQIKNAVVGTGRAQKS 120

Query: 123 QVQEMVKRLLDLPGLPGADAADALGIAITHAQVGRSMARLAEAAELSKTHAGTYR 177
           QVQ MV+++L LP  P ADAADALG+A+ H    +S+  +A   + S    G YR
Sbjct: 121 QVQHMVQQILKLPAAPQADAADALGVALCHFHTYQSL--IAMGGKASVRTYGRYR 173