Pairwise Alignments

Query, 341 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Variovorax sp. SCN45

Subject, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

 Score =  157 bits (398), Expect = 3e-43
 Identities = 106/295 (35%), Positives = 162/295 (54%), Gaps = 8/295 (2%)

Query: 44  LLARHDPVALQIVWDIRLPRTLGAWLAGALLGLAGSVAQGLFRNPLADPYLLGSASGASL 103
           LL   D  +  ++W+IRLPR   A L G  L ++G+V Q + RNPLA PY +G + GA  
Sbjct: 50  LLGSGDASSNLVIWNIRLPRIFAAILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMF 109

Query: 104 GVALALLMFG-GSAASTQWVM---RLGLTGAAFVGAVVAVMLTLLLAR--GVQQTLRLLL 157
           G  +A++  G G A ST  +       +T  AF+G+++ V   L+LA+  G+     ++L
Sbjct: 110 GACVAIITLGIGGAESTGHIAINNPYSITIFAFLGSLLGVCAVLILAKLKGLSPEA-MVL 168

Query: 158 AGVIVGVVLGAAKDLITIASADI-LQAIQGFILGSTGLVGWSACAVMAMVGAVCLLLGWA 216
           AGV +  +  AA  LI   + D+ L A+  +  G  G   W    +MA V  V L+    
Sbjct: 169 AGVAISSLFTAATTLIQYFADDMQLAAMVYWSFGDLGRPLWPEVKIMAFVAFVSLIYFIH 228

Query: 217 LAPVLDGLALGEATARSLGLPLGAMRAALVVVLALATGAAVAQTGLIAFVGLAAPHLVRS 276
                + L  GE TA+SLG+    +R + ++V +L T   VA  G+I FVGL  PH++R 
Sbjct: 229 KRWDYNALESGEETAKSLGVNTDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRI 288

Query: 277 AVKTTHARLIVLSALMGGLLLMSADLLARWLIAPQELPVGVLTAVLGGSYLLWLM 331
            V   +  LI L ++ G +L++ AD +AR +I+P  LPVG+LT+ LG    L+L+
Sbjct: 289 TVGGDYRYLIPLCSIFGAVLVLLADTIARTIISPIILPVGILTSFLGAPMFLYLL 343