Pairwise Alignments

Query, 290 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

Subject, 288 a.a., shikimate 5-dehydrogenase from Synechococcus elongatus PCC 7942

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 83/267 (31%), Positives = 124/267 (46%), Gaps = 18/267 (6%)

Query: 6   VIGNPVEHSRSPRI-HARFAELCGQQMDYGRRLVPIGAFAEGIAAFRAEAAERGDTARGC 64
           +IG+P+EHS SP I +A  AEL    +DY    VP       +A   A  A  G   +G 
Sbjct: 13  IIGDPIEHSLSPLIQNAAIAEL---GLDYC--YVPFPVKGADLATALAGLAAIG--VQGF 65

Query: 65  NITVPFKFEAAALAQHTSERATLAQAVNTLRFEADGGIHADNTDGIGLVNDIVRNAGVPL 124
           N+T+P K     L    SE A    +VNT+ ++ + G    NTD +G +  + +      
Sbjct: 66  NVTIPHKQAVMPLLSQVSELAQSVGSVNTV-WQTEQGWVGTNTDVLGFLAPL-QTLRSDW 123

Query: 125 QGKALLLIGAGGAAAGVLGPLLDAGAARVVVANRTVDKAIELVRRHAAVALRHGASLEAW 184
            G  ++L+G GGAA  V+   L  G + +    R   K     +     A     ++  W
Sbjct: 124 SGCRVVLLGCGGAARAVVAGCLQLGCSAIATVVRDAQKGDAFQQSWGDRA--DSLTIHDW 181

Query: 185 A-LDKVPGAFDVVVNATASSLAG--DAVPV---SADVLRPGGLAVDMMYGPAAAGFMAWA 238
           + +  V    D+VVN T   +    +  P+   +A  LRP  +A D++Y P+   F+  A
Sbjct: 182 SDIPDVLSTADLVVNTTPLGMDPHIERSPLDNSAAQQLRPETIAYDLIYTPSPTRFLQQA 241

Query: 239 EAHGAVARDGLGMLVEQAAESFEIWRG 265
            A G  A DGL MLV+Q A   +IW G
Sbjct: 242 IAQGCHAIDGLEMLVQQGAAGLKIWTG 268