Pairwise Alignments

Query, 290 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

Subject, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

 Score =  100 bits (250), Expect = 3e-26
 Identities = 83/266 (31%), Positives = 131/266 (49%), Gaps = 14/266 (5%)

Query: 6   VIGNPVEHSRSPRIHARFAELCGQQMDYGRRLVPIGAFAEGIAAFRAEAAERGDTARGCN 65
           +IG+PV+HS SP +H   A +   +++Y  R        E +    A A  +    RG N
Sbjct: 11  LIGHPVDHSFSPIMHN--AAIKDLKINY--RYFAFDVSEENLKDVVAGA--KAFNFRGFN 64

Query: 66  ITVPFKFEAAALAQHTSERATLAQAVNTLRFEADGGIHADNTDGIGLVNDIVRNAGVPLQ 125
           IT+P K             A    AVNT++ E +G     NTDGIG+   +    G+ L 
Sbjct: 65  ITIPHKMNIMKYLDEIDCDAEAIGAVNTVKIE-NGKAIGYNTDGIGVKKALEEKTGI-LI 122

Query: 126 GKALLLIGAGGAAAGVLGPLLDAGAARVVVANRTVDKAIELVRRHAAVALRHGASLEAWA 185
            K +L+IG+GGA+  V   L  A    + + NR ++KA E + +  +  L+    L    
Sbjct: 123 NKNILIIGSGGASRAVSFEL--AKDNNLTIVNRNIEKA-ENLSKEISRKLKKENPLNYGG 179

Query: 186 LDKVPGAFDVVVNATASSLAG--DAVPV-SADVLRPGGLAVDMMYGPAAAGFMAWAEAHG 242
           LD     FD+++N T   +    +  PV   + ++   + +D++Y P    F+  A+ +G
Sbjct: 180 LDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYG 239

Query: 243 AVARDGLGMLVEQAAESFEIWRGVRP 268
           A   +G+GMLV Q A SFEIW G++P
Sbjct: 240 AKTINGIGMLVYQGAVSFEIWTGIKP 265