Pairwise Alignments

Query, 384 a.a., Rod shape-determining protein RodA from Variovorax sp. SCN45

Subject, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

 Score =  325 bits (833), Expect = 1e-93
 Identities = 178/357 (49%), Positives = 233/357 (65%), Gaps = 13/357 (3%)

Query: 25  LAFAVLLLAFAGLLTMYSSGYDHGTRFVDHGRNMLLAGFIMFVVAQVPPQKLMLAAVPLY 84
           L   VL L   GL+ MYS+              M +A  IM ++AQ+PP+    AA  L+
Sbjct: 23  LLLGVLALMGFGLVVMYSASGQSLAMMDRQAMRMAMALIIMVILAQIPPRTYESAAPILF 82

Query: 85  AMGVALLVAVALFGITKKGAQRWINLGMV-IQPSEILKIAMPLMLAWWFQRREGQLRPLD 143
             GV LLV V LFG   KGAQRW++LG V  QPSE+LK+A+PLM+A +  +         
Sbjct: 83  FCGVILLVCVLLFGEISKGAQRWLDLGFVRFQPSELLKLAVPLMVARYIGKHALPPSFKT 142

Query: 144 FVVATVLLAVPVGLIMKQPDLGTSLLVLAAGLAVIFFAGLPWKLIVPPVVIGAVAITLIV 203
              + V++ VP  LI KQPDLGTS+L+ A+G+ VIF AG+ WKLI    V     + ++ 
Sbjct: 143 LFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWKLITAAAVAIGAFVPVLW 202

Query: 204 SFESRLCADGVDWRVLHDYQKQRVCTLLDPSKDPLGKGFHIIQGMIAIGSGGVGGKGFMQ 263
            F            ++H+YQK RV TL DP  DPLG G+HIIQ  IAIGSGG+ GKG++ 
Sbjct: 203 FF------------LMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGKGWLH 250

Query: 264 GTQTHLEFIPERTTDFIFAAYSEEFGLMGNLMLISAFILLIFRGLAIATNATTLFSRLLA 323
           GTQ+ LEF+PER TDFIFA  +EE+G++G L+L+S ++ +I RGL +A++A T F R++A
Sbjct: 251 GTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFGRMMA 310

Query: 324 GAVTMIFFTYAFVNMGMVSGILPVVGVPLPFISYGGTAMVTLGLGLGILMSIARARK 380
           G++ + FF Y FVN+GMVSGILPVVGVPLP ISYGGT+MVTL  G GILMSI   RK
Sbjct: 311 GSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHRK 367